RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SLC29A3Q9BZD2 475 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 IL37Q9NZH6 218 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 KCNK6Q9Y257 313 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 A0A1W2PP18 115 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC6A2P23975 617 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 PLA2G16P53816 162 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 PNLIPRP1P54315 467 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 KRT73Q86Y46 540 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 BTN2A2Q8WVV5 523 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 ITFG2Q969R8 447 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 ISG20Q96AZ6 181 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 AHCYL2Q96HN2 611 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 P2RY13Q9BPV8 354 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 TRIM8Q9BZR9 551 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 DPEP2Q9H4A9 486 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 NDOR1Q9UHB4 597 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 CORO2BQ9UQ03 480 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 OARD1Q9Y530 152 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 OAS3Q9Y6K5 1087 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 CENPFP49454 3210 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 RGS1Q08116 209 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 PRAMEF14Q5SWL7 426 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 PRAMEF13Q5VWM6 474 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC2A7Q6PXP3 512 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 TERB1Q8NA31 727 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 RERGQ96A58 199 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 TMIGD2Q96BF3 282 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 MYO10Q9HD67 2058 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 BPTFQ12830 3046 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 JUNP05412 331 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 DBTP11182 482 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 DPP6P42658 865 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 SRSF11Q05519 484 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 CBARPQ8N350 705 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 C1orf52Q8N6N3 182 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 PIH1D2Q8WWB5 315 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 HPS1Q92902 700 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 LRRC3Q9BY71 257 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 GSTO2Q9H4Y5 243 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 RMI1Q9H9A7 625 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 TRIM39Q9HCM9 518 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 TEKT2Q9UIF3 430 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 A0A0G2JN53 185 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 NR2F1P10589 423 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 C6P13671 934 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 EMX2Q04743 252 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC14A2Q15849 920 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 SPANXN4Q5MJ08 99 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZNF438Q7Z4V0 828 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 TAF8Q7Z7C8 310 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZNF655Q8N720 491 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 EXOSC8Q96B26 276 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 ASB9Q96DX5 294 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 L3HYPDHQ96EM0 354 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 CGREF1Q99674 301 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZNF576Q9H609 170 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 POLMQ9NP87 494 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 PTTG2Q9NZH5 202 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 SAMHD1Q9Y3Z3 626 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 URADA6NGE7 173 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 PPP6CO00743 305 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 PCDH7O60245 1069 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 MTHFD1P11586 935 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 CDK4P11802 303 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 TNNI3P19429 210 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 PRPS1L1P21108 318 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 ARNTP27540 789 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC5A2P31639 672 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 PHKG1Q16816 387 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 C18orf21Q32NC0 220 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 MARVELD2Q8N4S9 558 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 CANT1Q8WVQ1 401 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 RORBQ92753 470 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 MEAF6Q9HAF1 191 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 PCTPQ9UKL6 214 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 CDH7Q9ULB5 785 aa11.25□□□□□ -0.61
TRAPPC9-202ENST00000438773 A0A0J9YVX5 310 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 ARHGEF9O43307 516 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 CYP7B1O75881 506 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 BMP10O95393 424 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 GPIP06744 558 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 IDH2P48735 452 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 ACADVLP49748 655 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 XIAPP98170 497 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 SP140Q13342 867 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 CEACAM7Q14002 265 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 TYSND1Q2T9J0 566 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 RABL3Q5HYI8 236 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 HM13Q8TCT9 377 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 RAB7BQ96AH8 199 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 MTERF3Q96E29 417 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 NECTIN4Q96NY8 510 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 BTBD9Q96Q07 612 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 MCMBPQ9BTE3 642 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 MUC13Q9H3R2 512 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 SOHLH2Q9NX45 425 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 TAC3Q9UHF0 121 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 C3orf18Q9UK00 162 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 ANGPT4Q9Y264 503 aa11.24□□□□□ -0.61
TRAPPC9-202ENST00000438773 FADS3Q9Y5Q0 445 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms