RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 TBCCQ15814 346 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 CACHD1Q5VU97 1274 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 DUS1LQ6P1R4 473 aaKnown RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 TLDC1Q6P9B6 456 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 SH2D5Q6ZV89 423 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 FRA10AC1Q70Z53 315 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 CENPLQ8N0S6 344 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 ABHD11Q8NFV4 315 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 ZNF480Q8WV37 535 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 SKA2Q8WVK7 121 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PMM1Q92871 262 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PGM2Q96G03 612 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 DPH2Q9BQC3 489 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 CLK4Q9HAZ1 481 aaKnown RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PDE7BQ9NP56 450 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 TDRKHQ9Y2W6 561 aaKnown RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PLD2O14939 933 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 ZSCAN9O15535 394 aaPredicted RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 SNUPNO95149 360 aaKnown RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 CXCR2P25025 360 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 TPP2P29144 1249 aaPredicted RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 GCKP35557 465 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 ARFIP1P53367 373 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 TECRLQ5HYJ1 363 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 TCTE1Q5JU00 501 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 MROH9Q5TGP6 573 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 AGTRAPQ6RW13 159 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 SLC22A9Q8IVM8 553 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 SFTPA2Q8IWL1 248 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 C19orf47Q8N9M1 422 aaKnown RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 LINC01555Q8NAE3 123 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 OR4K1Q8NGD4 311 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 RHBDF1Q96CC6 855 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 PRR11Q96HE9 360 aaPredicted RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 NUDT22Q9BRQ3 303 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 ADGRE2Q9UHX3 823 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 N6AMT1Q9Y5N5 214 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 TRBV23OR9-2A0A075B6M9 112 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 OR2A25A4D2G3 310 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 RECKO95980 971 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 PYGBP11216 843 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 PEBP1P30086 187 aaKnown RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 HPDP32754 393 aaPredicted RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 ZNF33BQ06732 778 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 TARDBPQ13148 414 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 TGFBIQ15582 683 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 TMEM164Q5U3C3 297 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 ZNF425Q6IV72 752 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 RAB11FIP2Q7L804 512 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 FBXO39Q8N4B4 442 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 DNAJC22Q8N4W6 341 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 PNPLA1Q8N8W4 532 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 TTLQ8NG68 377 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 OR2L3Q8NG85 312 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 OR2A1Q8NGT9 310 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 SNRNP27Q8WVK2 155 aaKnown RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 ANKRD49Q8WVL7 239 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 MRPL46Q9H2W6 279 aaKnown RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 ARL15Q9NXU5 204 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 ADAMTS6Q9UKP5 1117 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 PLCL2Q9UPR0 1127 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 LOXL2Q9Y4K0 774 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 PCDHB3Q9Y5E6 796 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 CFAP20Q9Y6A4 193 aaKnown RBP11.06□□□□□ -0.64
SNHG3-202ENST00000437681 AP1M2Q9Y6Q5 423 aa11.06□□□□□ -0.64
SNHG3-202ENST00000437681 FITM1A5D6W6 292 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 CYC1P08574 325 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 TAC1P20366 129 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 IFFO1Q0D2I5 559 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 ASPHQ12797 758 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 GSPT2Q8IYD1 628 aaKnown RBP11.05□□□□□ -0.64
SNHG3-202ENST00000437681 DLG3Q92796 817 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 GRID1Q9ULK0 1009 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 RNF112Q9ULX5 631 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 PPT2Q9UMR5 302 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 TMEM184BQ9Y519 407 aaPredicted RBP11.05□□□□□ -0.64
SNHG3-202ENST00000437681 SMIM24O75264 130 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 RASSF9O75901 435 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 SLC16A8O95907 504 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 POLR2CP19387 275 aaPredicted RBP11.05□□□□□ -0.64
SNHG3-202ENST00000437681 CDH3P22223 829 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 PEX19P40855 299 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 GABRA4P48169 554 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 RPS15AP62244 130 aaKnown RBP11.05□□□□□ -0.64
SNHG3-202ENST00000437681 AMZ1Q400G9 498 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 CEP85LQ5SZL2 805 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 GARNL3Q5VVW2 1013 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 PRAMEF13Q5VWM6 474 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 IRGCQ6NXR0 463 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 C7orf57Q8NEG2 295 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 CFAP61Q8NHU2 1237 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 GATA6Q92908 595 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 TGM7Q96PF1 710 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 CAAP1Q9H8G2 361 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 CABIN1Q9Y6J0 2220 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 NPEPPSL1A6NEC2 478 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 PHGDHO43175 533 aaKnown RBP11.05□□□□□ -0.64
SNHG3-202ENST00000437681 MYZAPP0CAP1 466 aa11.05□□□□□ -0.64
SNHG3-202ENST00000437681 MYF5P13349 255 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms