RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 LIMK2P53671 638 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 PSMC6P62333 389 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 UBE2V1Q13404 147 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 MEP1AQ16819 746 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 CORO6Q6QEF8 472 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 FIP1L1Q6UN15 594 aaKnown RBP2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 TMCO3Q6UWJ1 677 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 INTS8Q75QN2 995 aaKnown RBP2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 ZNF534Q76KX8 674 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 HAUS6Q7Z4H7 955 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 ZNF554Q86TJ5 538 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 GUF1Q8N442 669 aaKnown RBP2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 APPL2Q8NEU8 664 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 OR1J1Q8NGS3 322 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 GSDMBQ8TAX9 411 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 NEK1Q96PY6 1258 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 SLC22A12Q96S37 553 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 MYADMQ96S97 322 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 PAFAH2Q99487 392 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 DDOQ99489 341 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 GFI1Q99684 422 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 TXLNGYQ9BZA5 131 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 KCNK15Q9H427 330 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 TAB2Q9NYJ8 693 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 GPR83Q9NYM4 423 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 IL17BQ9UHF5 180 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 NRBP1Q9UHY1 535 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 TET3O43151 1660 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 FAM135BQ49AJ0 1406 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 ERVK-7P63135 1459 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 ARHGAP23Q9P227 1491 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 MBD5Q9P267 1494 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 AHDC1Q5TGY3 1603 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 GCC2Q8IWJ2 1684 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 IGHV3OR16-10A0A075B7F0 116 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 TCRBV21S2A2A0A5A6 115 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 A8MV72 311 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 J3QR06 171 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 SOCS3O14543 225 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 ADAMDEC1O15204 470 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 PRAMEF11O60813 436 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 IGHV3-13P01766 116 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 ABCB1P08183 1280 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 GJA1P17302 382 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 GSDMDP57764 484 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 UBXN2AP68543 259 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 TMF1P82094 1093 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 PRKAA1Q13131 559 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 KRT33BQ14525 404 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 NR1D2Q14995 579 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 BMP2KLQ5H9B9 411 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 C9orf152Q5JTZ5 239 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 HPS6Q86YV9 775 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 GALNT13Q8IUC8 556 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 CEP97Q8IW35 865 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 DCLK2Q8N568 766 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 POGLUT1Q8NBL1 392 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 PAPD5Q8NDF8 572 aaKnown RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 OR5AP2Q8NGF4 316 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 OR4C3Q8NH37 302 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 LPGAT1Q92604 370 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 DYRK2Q92630 601 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 TMCO6Q96DC7 493 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 ARSGQ96EG1 525 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 DGAT2Q96PD7 388 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 GCNAQ96QF7 691 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 HGH1Q9BTY7 390 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 RPP25Q9BUL9 199 aaKnown RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 APOL6Q9BWW8 343 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 PITPNM3Q9BZ71 974 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 WWTR1Q9GZV5 400 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 MBNL1Q9NR56 388 aaKnown RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 GDE1Q9NZC3 331 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 LARSQ9P2J5 1176 aaKnown RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 TSPYL4Q9UJ04 414 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 HACL1Q9UJ83 578 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 ANAPC2Q9UJX6 822 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 MAGED1Q9Y5V3 778 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 MIA2Q96PC5 1412 aa2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 MARF1Q9Y4F3 1742 aaKnown RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 SCAF11Q99590 1463 aaKnown RBP2.64□□□□□ -1.99
HMGB1P31-201ENST00000437242 SLIT1O75093 1534 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 PRDM15P57071 1507 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 NALCNQ8IZF0 1738 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 GLI3P10071 1580 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 hCG_1809904A0A1W2PP81 198 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 A0A1W2PPE2 198 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 A0A1W2PR64 198 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 EPM2AB3EWF7 344 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 BCL2L11O43521 198 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 C22orf31O95567 290 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 DNTTP04053 509 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 EEF1DP29692 281 aaKnown RBP2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 KRT20P35900 424 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 MMP12P39900 470 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 GSCP56915 257 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 KRTAP10-1P60331 282 aa2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 SNRPEP62304 92 aaKnown RBP2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 PRPF4BQ13523 1007 aaKnown RBP2.63□□□□□ -1.99
HMGB1P31-201ENST00000437242 SNTB1Q13884 538 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms