RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PRAMEF9Q5VWM5 478 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 EFL1Q7Z2Z2 1120 aaKnown RBP22.21■■□□□ 1.15
CPSF4-204ENST00000436336 C17orf64Q86WR6 236 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 GATAD2AQ86YP4 633 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 ADGRF3Q8IZF5 1079 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 KYQ8NBH2 561 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 METTL6Q8TCB7 284 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 SLC22A18Q96BI1 424 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 ACAT2Q9BWD1 397 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 KCNK4Q9NYG8 393 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 DNAJC15Q9Y5T4 150 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 ARID1BQ8NFD5 2236 aaPredicted RBP22.21■■□□□ 1.15
CPSF4-204ENST00000436336 WDFY4Q6ZS81 3184 aa22.21■■□□□ 1.15
CPSF4-204ENST00000436336 A0A0G2JND7 137 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 BTN3A3O00478 584 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 HGSO14964 777 aaPredicted RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 ENGP17813 658 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 CASP2P42575 452 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 TBCCQ15814 346 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 MAVSQ7Z434 540 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 TMPRSS11BQ86T26 416 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 MYLK4Q86YV6 388 aaPredicted RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 PRSS33Q8NF86 280 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 OR2A1Q8NGT9 310 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 WDR34Q96EX3 536 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 SLC29A3Q9BZD2 475 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 SMOC1Q9H4F8 434 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 EHD1Q9H4M9 534 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 SH2B3Q9UQQ2 575 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 TIMM22Q9Y584 194 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 TRPC5OSA6NMA1 111 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 CHEK2O96017 543 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 RETP07949 1114 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 PSMB5P28074 263 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 SERPINB3P29508 390 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 PEBP1P30086 187 aaKnown RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 HMOX2P30519 316 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 HNF4AP41235 474 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 ARFIP2P53365 341 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 PRDX1Q06830 199 aaKnown RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 DOC2AQ14183 400 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 PDCD2Q16342 344 aaPredicted RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 ICE2Q659A1 982 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 ATG9BQ674R7 924 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 ZCCHC8Q6NZY4 707 aaKnown RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 SLCO4C1Q6ZQN7 724 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 OR4C6Q8NH72 309 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 C10orf82Q8WW14 230 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 PTCD3Q96EY7 689 aaKnown RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 GTPBP2Q9BX10 602 aaKnown RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 SPHK1Q9NYA1 384 aa22.2■■□□□ 1.14
CPSF4-204ENST00000436336 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.2■■□□□ 1.14
CPSF4-204ENST00000436336 PIPSLA2A3N6 862 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 LILRA5A6NI73 299 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 C1GALT1C1LP0DN25 315 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 JUPP14923 745 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 KIR2DS3Q14952 304 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 GRHL2Q6ISB3 625 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 NXPE4Q6UWF7 544 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 ZNF761Q86XN6 746 aaPredicted RBP22.19■■□□□ 1.14
CPSF4-204ENST00000436336 SLC35F3Q8IY50 421 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 SUMF1Q8NBK3 374 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 TWIST2Q8WVJ9 160 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 SLC38A3Q99624 504 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 TBC1D10AQ9BXI6 508 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 TMEM120AQ9BXJ8 343 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 NUF2Q9BZD4 464 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 ENTPD2Q9Y5L3 495 aa22.19■■□□□ 1.14
CPSF4-204ENST00000436336 KCNE1BA0A087WTH5 132 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 OR6C74A6NCV1 312 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 ISM1B1AKI9 464 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 PCDHGA12O60330 932 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 SKAP2O75563 359 aaPredicted RBP22.18■■□□□ 1.14
CPSF4-204ENST00000436336 CCNDBP1O95273 360 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 ABATP80404 500 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 BTKQ06187 659 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 CATSPEREQ5SY80 951 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 EPGNQ6UW88 154 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 OR2I1PQ8NGU4 316 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 SEC16BQ96JE7 1060 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 EFCAB11Q9BUY7 163 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 PELI2Q9HAT8 420 aa22.18■■□□□ 1.14
CPSF4-204ENST00000436336 NUDT21O43809 227 aaKnown RBP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 RRP9O43818 475 aaKnown RBP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 JUNP05412 331 aaKnown RBP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 CD22P20273 847 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 ATXN3P54252 364 aaPredicted RBP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 INHBCP55103 352 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 SF1Q15637 639 aaKnown RBP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 CPSF6Q16630 551 aaKnown RBP eCLIP22.17■■□□□ 1.14
CPSF4-204ENST00000436336 FAM219BQ5XKK7 198 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 TCEAL6Q6IPX3 200 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 OOSP2Q86WS3 158 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 MINDY1Q8N5J2 469 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 CCDC197Q8NCU1 140 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 OR10G6Q8NH81 332 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 STON2Q8WXE9 905 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 TCEAL3Q969E4 200 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 PFDN4Q9NQP4 134 aa22.17■■□□□ 1.14
CPSF4-204ENST00000436336 APOBEC2Q9Y235 224 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms