RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 GPR89AB7ZAQ6 455 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 LEFTY1O75610 366 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SOX30O94993 753 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 GPR89BP0CG08 455 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 FEN1P39748 380 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 TMED10P49755 219 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 RGS8P57771 180 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CYP4F2P78329 520 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 MACC1Q6ZN28 852 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 ANKRD46Q86W74 232 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 RBM18Q96H35 190 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CNOT6Q9ULM6 557 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CLIC1O00299 241 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SIX3O95343 332 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 PLD6Q8N2A8 252 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 LRTOMTQ8WZ04 291 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 HDHD2Q9H0R4 259 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CDC7O00311 574 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SLC31A1O15431 190 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 ADAMTS4O75173 837 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 COQ9O75208 318 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 TCF3P15923 654 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 TIE1P35590 1138 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 HKDC1Q2TB90 917 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 DGKKQ5KSL6 1271 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 KIAA1161Q6NSJ0 714 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CBARPQ8N350 705 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 FAM25AB3EWG3 89 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 FAM25CB3EWG5 89 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 FAM25GB3EWG6 89 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SLC5A9Q2M3M2 681 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 LRRC73Q5JTD7 316 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CACTIN-AS1Q8N1I8 211 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 CDK15Q96Q40 435 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 EBF2Q9HAK2 575 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 ACSS2Q9NR19 701 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 LYARQ9NX58 379 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 WWP2O00308 870 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 HOXB2P14652 356 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SPINT3P49223 89 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 MGAT3Q09327 533 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 HSPB3Q12988 150 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 RGS21Q2M5E4 152 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 MOSPD2Q8NHP6 518 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SLC38A4Q969I6 547 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 NT5C3BQ969T7 300 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 SIPA1Q96FS4 1042 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 PACSIN3Q9UKS6 424 aa11.24□□□□□ -0.61
PTCH1-208ENST00000430669 WBP11Q9Y2W2 641 aaKnown RBP11.24□□□□□ -0.61
PTCH1-208ENST00000430669 IL4RP24394 825 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 MYL9P24844 172 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 SLC7A9P82251 487 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF846Q147U1 533 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 KBTBD6Q86V97 674 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 DCBLD1Q8N8Z6 715 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ZHX1-C8orf76Q96EF9 292 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 MVB12BQ9H7P6 319 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 HHATLQ9HCP6 504 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ARPC2O15144 300 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 TRMUO75648 421 aaKnown RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ATP5A1P25705 553 aaKnown RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 NCBP2P52298 156 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 AQP4P55087 323 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 MTTPP55157 894 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 BLMHQ13867 455 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 DSC3Q14574 896 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 AGTRAPQ6RW13 159 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 TMIGD1Q6UXZ0 262 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 CXXC5Q7LFL8 322 aaKnown RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 PCDHGA4Q9Y5G9 962 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 SCN8AQ9UQD0 1980 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 CCDC159P0C7I6 412 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 LAMP2P13473 410 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 MAGEA3P43357 314 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 MZT2BQ6NZ67 158 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 FAM129CQ86XR2 697 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 GPR65Q8IYL9 337 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 OR56A1Q8NGH5 318 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 LMLNQ96KR4 655 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 KLF16Q9BXK1 252 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 BRINP2Q9C0B6 783 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 MS4A12Q9NXJ0 267 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 RAPGEFL1Q9UHV5 662 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 VEGFBP49765 207 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ABHD18Q0P651 414 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ZNF311Q5JNZ3 666 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 GKN2Q86XP6 184 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 TSTD1Q8NFU3 115 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 PAIP1Q9H074 479 aaKnown RBP11.23□□□□□ -0.61
PTCH1-208ENST00000430669 C2orf78A6NCI8 922 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 NEMP2A6NFY4 417 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 IQCF5A8MTL0 148 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 ANGPTL1O95841 491 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 NT5EP21589 574 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 C5AR1P21730 350 aa11.23□□□□□ -0.61
PTCH1-208ENST00000430669 MTPNP58546 118 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms