RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 C1orf21Q9H246 121 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 PHPT1Q9NRX4 125 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ACTR3BQ9P1U1 418 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 TRPC4Q9UBN4 977 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 ERRFI1Q9UJM3 462 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 POU2F3Q9UKI9 436 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 FBXW2Q9UKT8 454 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 GPR132Q9UNW8 380 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 AGTPBP1Q9UPW5 1226 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 TMED3Q9Y3Q3 217 aa2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB1P9-201ENST00000429856 PTPRCP08575 1304 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SYCE3A1L190 88 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ELOVL7A1L3X0 281 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 HYKKA2RU49 373 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 NEMP2A6NFY4 417 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 LILRA5A6NI73 299 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 PRAC2D3DTV9 90 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 CCL24O00175 119 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 HMMRO75330 724 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ATP6AP2O75787 350 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 GLCEO94923 617 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 LETM1O95202 739 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 CXCL14O95715 111 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 WDPCPO95876 746 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 IGKV3-20P01619 116 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 IGHV2-70P01814 119 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SPP1P10451 314 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 FERP16591 822 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 CCNA2P20248 432 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 S1PR1P21453 382 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 AHCYP23526 432 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 EEF1B2P24534 225 aaKnown RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 NKX2-1P43699 371 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 OR3A1P47881 315 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SERPINH1P50454 418 aaKnown RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SMSP52788 366 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ATXN3P54252 364 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 DLX5P56178 289 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 CLDN15P56746 228 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ISL1P61371 349 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 EEF1A1P68104 462 aaKnown RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 DLK1P80370 383 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 PDE1BQ01064 536 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 DMPKQ09013 629 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF415Q09FC8 603 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 KLHL30Q0D2K2 578 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 TEFQ10587 303 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ILF3Q12906 894 aaKnown RBP eCLIP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 GAGE2BQ13066 116 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZBTB17Q13105 803 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 CUL3Q13618 768 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 GAGE2EQ4V326 116 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 IFI44LQ53G44 452 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 PHLDA2Q53GA4 152 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SYT14P1Q58G82 188 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 EEF1A1P5Q5VTE0 462 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 IRAK1BP1Q5VVH5 260 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 GAGE2AQ6NT46 116 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 CASC4Q6P4E1 433 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 NOTUMQ6P988 496 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ENPP7Q6UWV6 458 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 MARK2Q7KZI7 788 aaKnown RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 CUZD1Q86UP6 607 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 GPR180Q86V85 440 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 KMT5CQ86Y97 462 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 MAP7D3Q8IWC1 876 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF441Q8N8Z8 693 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 PAPD5Q8NDF8 572 aaKnown RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SSMEM1Q8WWF3 244 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SLC13A3Q8WWT9 602 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ATL1Q8WXF7 558 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 TAF4BQ92750 862 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SEMA4DQ92854 862 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 DAZLQ92904 295 aaKnown RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 MRPL38Q96DV4 380 aaKnown RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SGF29Q96ES7 293 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 DTD2Q96FN9 168 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 C5orf30Q96GV9 206 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 GAL3ST4Q96RP7 486 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 RUFY1Q96T51 708 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF559Q9BR84 538 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 LMF2Q9BU23 707 aaKnown RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 S1PR5Q9H228 398 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 FKRPQ9H9S5 495 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 RNPEPL1Q9HAU8 725 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 CDH20Q9HBT6 801 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 TMEM30AQ9NV96 361 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 MIOSQ9NXC5 875 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SPG21Q9NZD8 308 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 B3GAT1Q9P2W7 334 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SPASTQ9UBP0 616 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 GAGE2DQ9UEU5 116 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 LRWD1Q9UFC0 647 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 MTUS1Q9ULD2 1270 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 TRIM17Q9Y577 477 aa2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 SPIN1Q9Y657 262 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P9-201ENST00000429856 DHX29Q7Z478 1369 aaKnown RBP2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 PCDH11YQ9BZA8 1340 aa2.76□□□□□ -1.97
HMGB1P9-201ENST00000429856 TEX13DA0A0J9YY54 714 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms