RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FDXRP22570 491 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 CXCR2P25025 360 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 SRSF11Q05519 484 aaKnown RBP17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 SPA17Q15506 151 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 VWA2Q5GFL6 755 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 MTFR2Q6P444 385 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 LINC00523Q86TU6 105 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 LAPTM4BQ86VI4 370 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 OR4N4Q8N0Y3 316 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 KRT222Q8N1A0 295 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 OR6P1Q8NGX9 317 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 GSDMBQ8TAX9 411 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 SKA2Q8WVK7 121 aaPredicted RBP17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 ALG3Q92685 438 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 HAS2Q92819 552 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 YIPF2Q9BWQ6 316 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 CARD6Q9BX69 1037 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 SEC14L3Q9UDX4 400 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 MRPS2Q9Y399 296 aaKnown RBP17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 NF1P21359 2839 aa17.45■□□□□ 0.38
UPK3BP1-201ENST00000428678 IDSB3KWA1 339 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 PRICKLE3O43900 615 aaPredicted RBP17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 NRP2O60462 931 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 WFS1O76024 890 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 BMP10O95393 424 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 CRYABP02511 175 aaKnown RBP17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 EMP2P54851 167 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 GDF10P55107 478 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 NAP1L1P55209 391 aaKnown RBP17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 ZNF630Q2M218 657 aaPredicted RBP17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 MUM1Q2TAK8 710 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 FAAH2Q6GMR7 532 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 RPTNQ6XPR3 784 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 RAB42Q8N4Z0 105 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 OR4L1Q8NH43 312 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 CABS1Q96KC9 395 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 ABI3Q9P2A4 366 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 TRPC4Q9UBN4 977 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 ITGB1BP2Q9UKP3 347 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 TTC7AQ9ULT0 858 aaPredicted RBP17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 CACNA1CQ13936 2221 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 CPAMD8Q8IZJ3 1885 aa17.44■□□□□ 0.38
UPK3BP1-201ENST00000428678 KRT87PA6NCN2 255 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 GOLGA6L9A6NEM1 432 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 FFAR3O14843 346 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 GPR42O15529 346 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 SLCO2B1O94956 709 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 RASAL1O95294 804 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 WDPCPO95876 746 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 CELA2AP08217 269 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 MST1P26927 711 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 AOAHP28039 575 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 PPARGP37231 505 aaPredicted RBP17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 CA7P43166 264 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 BDKRB1P46663 353 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 PRAMEP78395 509 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 RBPJQ06330 500 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 CDH17Q12864 832 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 TBX2Q13207 712 aaPredicted RBP17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 SEMA3AQ14563 771 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 FASTKD1Q53R41 847 aaKnown RBP17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 TSTD2Q5T7W7 516 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 ZNF534Q76KX8 674 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 RNF44Q7L0R7 432 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 OR2L3Q8NG85 312 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 SUN3Q8TAQ9 357 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 RAD51AP1Q96B01 352 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 C10orf90Q96M02 699 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 TMEM121Q9BTD3 319 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 RIC8BQ9NVN3 520 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 MED13LQ71F56 2210 aa17.43■□□□□ 0.38
UPK3BP1-201ENST00000428678 IGLV3-12A0A075B6K2 115 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 IGHV1-45A0A0A0MS14 117 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 HEXBP07686 556 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 CCSMST1Q4G0I0 132 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 PTRHD1Q6GMV3 140 aaKnown RBP17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 HIBCHQ6NVY1 386 aaPredicted RBP17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 PPP1R21Q6ZMI0 780 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 RIPOR1Q6ZS17 1223 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 LDB1Q86U70 411 aaPredicted RBP17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 DNAJB8Q8NHS0 232 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 ZNF778Q96MU6 729 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 ZFYVE21Q9BQ24 234 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 CDC14AQ9UNH5 594 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 RUVBL2Q9Y230 463 aaKnown RBP17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 KLK4Q9Y5K2 254 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 NFS1Q9Y697 457 aa17.42■□□□□ 0.38
UPK3BP1-201ENST00000428678 PRMT5O14744 637 aaPredicted RBP17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 PRPF4O43172 522 aaKnown RBP eCLIP17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 C1orf105O95561 183 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 ITGAMP11215 1152 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 CYLC1P35663 651 aaPredicted RBP17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 CASP6P55212 293 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 DSG2Q14126 1118 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 PRTGQ2VWP7 1150 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 AARS2Q5JTZ9 985 aaKnown RBP17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 CCDC170Q8IYT3 715 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 TC2NQ8N9U0 490 aa17.41■□□□□ 0.38
UPK3BP1-201ENST00000428678 OR2A1Q8NGT9 310 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms