RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RPN2P04844 631 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 GRNP28799 593 aaKnown RBP15.78■□□□□ 0.12
VARS-216ENST00000428445 SESN2P58004 480 aaPredicted RBP15.78■□□□□ 0.12
VARS-216ENST00000428445 EEF1A2Q05639 463 aaKnown RBP15.78■□□□□ 0.12
VARS-216ENST00000428445 MFAP5Q13361 173 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 OASLQ15646 514 aaKnown RBP15.78■□□□□ 0.12
VARS-216ENST00000428445 YOD1Q5VVQ6 348 aaPredicted RBP15.78■□□□□ 0.12
VARS-216ENST00000428445 ATG9BQ674R7 924 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 B3GNTL1Q67FW5 361 aaPredicted RBP15.78■□□□□ 0.12
VARS-216ENST00000428445 CES3Q6UWW8 571 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 NLRP9Q7RTR0 991 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 SIRT6Q8N6T7 355 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 OR2L3Q8NG85 312 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 BRIX1Q8TDN6 353 aaKnown RBP15.78■□□□□ 0.12
VARS-216ENST00000428445 PSMF1Q92530 271 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 C10orf90Q96M02 699 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 LMF1Q96S06 567 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 DESI2Q9BSY9 194 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 P2RY12Q9H244 342 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 GALPQ9UBC7 116 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 ANAPC5Q9UJX4 755 aa15.78■□□□□ 0.12
VARS-216ENST00000428445 TEP1Q99973 2627 aaKnown RBP15.78■□□□□ 0.12
VARS-216ENST00000428445 TARM1B6A8C7 271 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 GOLGA8KD6RF30 607 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 GOLGA8TH3BQL2 631 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 PRMT5O14744 637 aaPredicted RBP15.77■□□□□ 0.12
VARS-216ENST00000428445 SRPX2O60687 465 aaPredicted RBP15.77■□□□□ 0.12
VARS-216ENST00000428445 HPP00738 406 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 ACPPP15309 386 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 NMBRP28336 390 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 FDFT1P37268 417 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 ZNF75DP51815 510 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 SNRPNP63162 240 aaKnown RBP15.77■□□□□ 0.12
VARS-216ENST00000428445 ARG2P78540 354 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 OCA2Q04671 838 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 KIF5AQ12840 1032 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 CTSL3PQ5NE16 218 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 FAM180AQ6UWF9 173 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 SUSD1Q6UWL2 747 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 RAD51AP1Q96B01 352 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 SLX1AQ9BQ83 275 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 TSSK1BQ9BXA7 367 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 OLAHQ9NV23 265 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 ZNF282Q9UDV7 671 aaPredicted RBP15.77■□□□□ 0.12
VARS-216ENST00000428445 NXT1Q9UKK6 140 aaKnown RBP15.77■□□□□ 0.12
VARS-216ENST00000428445 ZNF148Q9UQR1 794 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 CAPN6Q9Y6Q1 641 aa15.77■□□□□ 0.12
VARS-216ENST00000428445 HEATR5BQ9P2D3 2071 aa15.77■□□□□ 0.11
VARS-216ENST00000428445 ABCA12Q86UK0 2595 aa15.77■□□□□ 0.11
VARS-216ENST00000428445 PRSS44E7EML9 344 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 H0YGG7 62 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 MAP2K7O14733 419 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 APRTP07741 180 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 F7P08709 466 aaPredicted RBP15.76■□□□□ 0.11
VARS-216ENST00000428445 STSP08842 583 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 PRR35P0CG20 571 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 COX6A1P12074 109 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 POU3F2P20265 443 aaPredicted RBP15.76■□□□□ 0.11
VARS-216ENST00000428445 ST13P50502 369 aaKnown RBP15.76■□□□□ 0.11
VARS-216ENST00000428445 EFNA3P52797 238 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 EIF3BP55884 814 aaKnown RBP15.76■□□□□ 0.11
VARS-216ENST00000428445 ARF3P61204 181 aaPredicted RBP15.76■□□□□ 0.11
VARS-216ENST00000428445 TMED2Q15363 201 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 SYT16Q17RD7 645 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 ZNF324BQ6AW86 544 aaPredicted RBP15.76■□□□□ 0.11
VARS-216ENST00000428445 TTC23LQ6PF05 361 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 KBTBD2Q8IY47 623 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 PPHLN1Q8NEY8 458 aaKnown RBP15.76■□□□□ 0.11
VARS-216ENST00000428445 HES6Q96HZ4 224 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 DPH7Q9BTV6 452 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 ENAMQ9NRM1 1142 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 IL1RAPL1Q9NZN1 696 aa15.76■□□□□ 0.11
VARS-216ENST00000428445 NSG1A0A0A6YYJ2 146 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 HNRNPRO43390 633 aaKnown RBP15.75■□□□□ 0.11
VARS-216ENST00000428445 NIPSNAP2O75323 286 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 FKBP9O95302 570 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 STATHP02808 62 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 FBLP22087 321 aaKnown RBP15.75■□□□□ 0.11
VARS-216ENST00000428445 FMO4P31512 558 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 RPL22P35268 128 aaKnown RBP15.75■□□□□ 0.11
VARS-216ENST00000428445 CARSP49589 748 aaKnown RBP15.75■□□□□ 0.11
VARS-216ENST00000428445 TDGF1P3P51864 188 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 EMP2P54851 167 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 PER3P56645 1201 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 TSTA3Q13630 321 aaPredicted RBP15.75■□□□□ 0.11
VARS-216ENST00000428445 HKDC1Q2TB90 917 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 RNF44Q7L0R7 432 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 OTOAQ7RTW8 1153 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 RNF10Q8N5U6 811 aaKnown RBP15.75■□□□□ 0.11
VARS-216ENST00000428445 BCORP1Q8N888 145 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 GSDMBQ8TAX9 411 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 CABS1Q96KC9 395 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 ABCF3Q9NUQ8 709 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 TRPC4Q9UBN4 977 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 GNPTGQ9UJJ9 305 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 FAM169AQ9Y6X4 670 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 APCP25054 2843 aa15.75■□□□□ 0.11
VARS-216ENST00000428445 IGKV1-8A0A0C4DH67 115 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 OR2A25A4D2G3 310 aa15.74■□□□□ 0.11
VARS-216ENST00000428445 IDSB3KWA1 339 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms