RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SOCS5O75159 536 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 ECI2O75521 394 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 FCGR1AP12314 374 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 S100A3P33764 101 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CCT8P50990 548 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 RPS15P62841 145 aaKnown RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 VPS26BQ4G0F5 336 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 POMZP3Q6PJE2 187 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 TMEM132CQ8N3T6 1108 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CNTD1Q8N815 330 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 SLC39A3Q9BRY0 314 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 RPP25Q9BUL9 199 aaKnown RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PLAGL1Q9UM63 463 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 RREB1Q92766 1687 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 TTKP33981 857 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 DEFA1P59665 94 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 DEFA3P59666 94 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CHIT1Q13231 466 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 TLR1Q15399 786 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PM20D1Q6GTS8 502 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 THOC7Q6I9Y2 204 aaKnown RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 KIAA1161Q6NSJ0 714 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PAOXQ6QHF9 649 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 EPGNQ6UW88 154 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 OFCC1Q8IZS5 231 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CENPLQ8N0S6 344 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 SDR16C5Q8N3Y7 309 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 ATP6V1C2Q8NEY4 427 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 OMA1Q96E52 524 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 TCF12Q99081 682 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 BDH2Q9BUT1 245 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CRISPLD1Q9H336 500 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 TRIM39Q9HCM9 518 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 SLC2A6Q9UGQ3 507 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 MKL2Q9ULH7 1088 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 MICAL3Q7RTP6 2002 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 DLX3O60479 287 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 OR6A2O95222 327 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 H6PDO95479 791 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 GSRP00390 522 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 AHSGP02765 367 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 BUD31P41223 144 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 SLC1A2P43004 574 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 HHEXQ03014 270 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 GNA13Q14344 377 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CCNYL2Q5T2Q4 361 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 IL23RQ5VWK5 629 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PRMT9Q6P2P2 845 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 ATG14Q6ZNE5 492 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 ADHFE1Q8IWW8 467 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 UMODL1-AS1Q8N2C9 162 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 LINC01465Q8N7H1 131 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 GLYATL1Q969I3 302 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 TAMM41Q96BW9 452 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PKP2Q99959 881 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 C20orf27Q9GZN8 174 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 RDH14Q9HBH5 336 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PDE7BQ9NP56 450 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 ANAPC2Q9UJX6 822 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 N6AMT1Q9Y5N5 214 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 COPG1Q9Y678 874 aaKnown RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 DLEC1Q9Y238 1755 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PHIPQ8WWQ0 1821 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 DCLK1O15075 740 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 LDOC1O95751 146 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-204ENST00000427724 OTCP00480 354 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 COL6A2P12110 1019 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 HPCAL1P37235 193 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 CASRP41180 1078 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 DPP6P42658 865 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 HK2P52789 917 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 OGFOD2Q6N063 350 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 ALKAL1Q6UXT8 129 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 PSMA8Q8TAA3 256 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 FNDC8Q8TC99 324 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 HTRA1Q92743 480 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 FBRSL1Q9HCM7 1045 aaKnown RBP10.37□□□□□ -0.75
TCOF1-204ENST00000427724 SPATA7Q9P0W8 599 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 TAC3Q9UHF0 121 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 TEKT2Q9UIF3 430 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 CLCA3PQ9Y6N3 262 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 OR5K4A6NMS3 321 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 B4GALT2O60909 372 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 TFPIP10646 304 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 FUT4P22083 530 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 IL4RP24394 825 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 SLC6A4P31645 630 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 TPTEP56180 551 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 DLX2Q07687 328 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-204ENST00000427724 SPEM2Q0P670 501 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 CCNIQ14094 377 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 CTC1Q2NKJ3 1217 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 TIGD2Q4W5G0 525 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 REP15Q6BDI9 236 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 TRNP1Q6NT89 227 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 SMPDL3BQ92485 455 aa10.37□□□□□ -0.75
TCOF1-204ENST00000427724 C6orf62Q9GZU0 229 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-204ENST00000427724 GIN1Q9NXP7 522 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms