RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 PDLIM5Q96HC4 596 aaKnown RBP15.12■□□□□ 0.01
CLK3P2-201ENST00000427566 CCDC77Q9BR77 488 aa15.12■□□□□ 0.01
CLK3P2-201ENST00000427566 SLC12A9Q9BXP2 914 aa15.12■□□□□ 0.01
CLK3P2-201ENST00000427566 PARVBQ9HBI1 364 aa15.12■□□□□ 0.01
CLK3P2-201ENST00000427566 POPDC3Q9HBV1 291 aa15.12■□□□□ 0.01
CLK3P2-201ENST00000427566 SYTL2Q9HCH5 934 aa15.12■□□□□ 0.01
CLK3P2-201ENST00000427566 TMEM184BQ9Y519 407 aaPredicted RBP15.12■□□□□ 0.01
CLK3P2-201ENST00000427566 AHCTF1Q8WYP5 2266 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 EXOC1LA0A1B0GW35 172 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 TIAF1O95411 115 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 ALDOAP04075 364 aaKnown RBP15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 C8GP07360 202 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 INHBAP08476 426 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 FGF5P12034 268 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 LIFP15018 202 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 MAP4P27816 1152 aaKnown RBP15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 IMPA1P29218 277 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 CSRP3P50461 194 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 PPP2R2AP63151 447 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 DLG1Q12959 904 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 ZIC1Q15915 447 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 TNFAIP8L3Q5GJ75 292 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 LRRC56Q8IYG6 542 aaPredicted RBP15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 KIAA1143Q96AT1 154 aaPredicted RBP15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 TSPAN17Q96FV3 270 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 TRAPPC9Q96Q05 1148 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 PITPNM3Q9BZ71 974 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 CNOT10Q9H9A5 744 aaKnown RBP15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 GPN2Q9H9Y4 310 aaPredicted RBP15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 FANCEQ9HB96 536 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 UTP6Q9NYH9 597 aaKnown RBP15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 SPATA7Q9P0W8 599 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 SSUH2Q9Y2M2 353 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 LAMA5O15230 3695 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 SPTBP11277 2137 aa15.11■□□□□ 0.01
CLK3P2-201ENST00000427566 LOC101059948A0A1B0GTJ6 334 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 E7ENX8 843 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 HCRTR1O43613 425 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 NTRK1P04629 796 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 CYP2A7P20853 494 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 MSH2P43246 934 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 PNLIPRP1P54315 467 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 MAGOHP61326 146 aaKnown RBP15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 GNGT1P63211 74 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 IRF9Q00978 393 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 TAP2Q03519 686 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 ILF2Q12905 390 aaKnown RBP15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 SP140Q13342 867 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 TSTA3Q13630 321 aaPredicted RBP15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 CSHL1Q14406 222 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 KIR2DS3Q14952 304 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 TSNQ15631 228 aaKnown RBP15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 PPP1R3AQ16821 1122 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 PWWP2BQ6NUJ5 590 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 C6orf15Q6UXA7 325 aaPredicted RBP15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 RAPH1Q70E73 1250 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 TMEM126BQ8IUX1 230 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 CARFQ8N187 725 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 ESX1Q8N693 406 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 HMGCLL1Q8TB92 370 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 MCOLN3Q8TDD5 553 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 N4BP2L2Q92802 583 aaPredicted RBP15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 UBXN10Q96LJ8 280 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 DHRS4Q9BTZ2 278 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 ACAT2Q9BWD1 397 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 RAB11FIP5Q9BXF6 653 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 PPCSQ9HAB8 311 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 FAM60AQ9NP50 221 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 SNX15Q9NRS6 342 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 ABCF3Q9NUQ8 709 aa15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 STOX2Q9P2F5 926 aaPredicted RBP15.1■□□□□ 0.01
CLK3P2-201ENST00000427566 TLDC2A0PJX2 215 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 EIF4E1BA6NMX2 242 aaKnown RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 TMEM150CB9EJG8 249 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 SLC16A5O15375 505 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 NRP2O60462 931 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 GUCA1CO95843 209 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 DLGAP3O95886 979 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 CCNYL3P0C7X3 344 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 CD1DP15813 335 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 WT1P19544 449 aaPredicted RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 MDH1P40925 334 aaKnown RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 CYP4F2P78329 520 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 COL9A2Q14055 689 aaPredicted RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 SF1Q15637 639 aaKnown RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 TAF1BQ53T94 588 aaPredicted RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 SYTL1Q8IYJ3 562 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 RIBC1Q8N443 379 aaPredicted RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 RAB42Q8N4Z0 105 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 OR2A1Q8NGT9 310 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 PTERQ96BW5 349 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 UBL7Q96S82 380 aaPredicted RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 MIPEPQ99797 713 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 SPRY4Q9C004 299 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 DERL2Q9GZP9 239 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 ATG10Q9H0Y0 220 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 BTRCQ9Y297 605 aa15.09■□□□□ 0.01
CLK3P2-201ENST00000427566 PCDHGA4Q9Y5G9 962 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms