RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 FAM90A12PA8MX19 464 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 FAM90A23PA8MXZ1 464 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 K7ERI5 159 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 COPEO14579 308 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 OGTO15294 1046 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 GYG2O15488 501 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SPAG7O75391 227 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 TOM1L1O75674 476 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CNTN5O94779 1100 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CCNE2O96020 404 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 MT-ND3P03897 115 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ENO1P06733 434 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CETPP11597 493 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 LYL1P12980 280 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 GNAZP19086 355 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 RPS12P25398 132 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 GCAP28676 217 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 STIP1P31948 543 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ICAM3P32942 547 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 RPA3P35244 121 aaPredicted RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 MVDP53602 400 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ADPRHP54922 357 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 TAS2R40P59535 323 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 RPL26P61254 145 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SARNPP82979 210 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SHC2P98077 582 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 OTUD4Q01804 1114 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SLC25A11Q02978 314 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 EGR4Q05215 589 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SPP2Q13103 211 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 MXD4Q14582 209 aaPredicted RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 BAK1Q16611 211 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CCDC14Q49A88 953 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ACCSLQ4AC99 568 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 TAF1BQ53T94 588 aaPredicted RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 PIK3CD-AS1Q5SR53 167 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ASPHD1Q5U4P2 390 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 LIPMQ5VYY2 423 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 AP1ARQ63HQ0 302 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SNRNP48Q6IEG0 339 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ARCQ7LC44 396 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 OTOAQ7RTW8 1153 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CUZD1Q86UP6 607 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SLC26A11Q86WA9 606 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CDKL3Q8IVW4 592 aaPredicted RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CCDC60Q8IWA6 550 aaPredicted RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 VPS52Q8N1B4 723 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 NAT8LQ8N9F0 302 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 BANPQ8N9N5 519 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 LSM14AQ8ND56 463 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ADPRHL1Q8NDY3 354 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 FBXO36Q8NEA4 188 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CCDC110Q8TBZ0 833 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SLC44A1Q8WWI5 657 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ZNF75CPQ92670 426 aaPredicted RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 USP6NLQ92738 828 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SH3GL3Q99963 347 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 BTBD10Q9BSF8 475 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 PI4K2AQ9BTU6 479 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 TBC1D10AQ9BXI6 508 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 MAK16Q9BXY0 300 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 FAM192AQ9GZU8 254 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 LHX5Q9H2C1 402 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 GHITMQ9H3K2 345 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 DHX33Q9H6R0 707 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 RPAP3Q9H6T3 665 aaPredicted RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 RAVER2Q9HCJ3 691 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 ACP6Q9NPH0 428 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 XPNPEP1Q9NQW7 623 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 MRGBPQ9NV56 204 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 THAP1Q9NVV9 213 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 FBXO40Q9UH90 709 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 CHORDC1Q9UHD1 332 aaPredicted RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 XPO7Q9UIA9 1087 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 L3MBTL1Q9Y468 752 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 PCDHAC2Q9Y5I4 1007 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 MYO18AQ92614 2054 aaKnown RBP4.96□□□□□ -1.62
LINC00458-202ENST00000427299 SHROOM3Q8TF72 1996 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 MYO16Q9Y6X6 1858 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 COL4A5P29400 1685 aa4.96□□□□□ -1.62
LINC00458-202ENST00000427299 A0A0G2JND7 137 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 SIGLEC16A6NMB1 481 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 A6NNC1 897 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 YDJCA8MPS7 323 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 A8MUI8 341 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 C19orf81C9J6K1 198 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 VWA5AO00534 786 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 TRDMT1O14717 391 aaKnown RBP4.95□□□□□ -1.62
LINC00458-202ENST00000427299 BIRC5O15392 142 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 CST8O60676 142 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 MAGEC1O60732 1142 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 GLRA3O75311 464 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 FKBP6O75344 327 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 LRCH4O75427 683 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 CSDE1O75534 798 aaKnown RBP4.95□□□□□ -1.62
LINC00458-202ENST00000427299 SNRPAP09012 282 aaKnown RBP4.95□□□□□ -1.62
LINC00458-202ENST00000427299 ALDOCP09972 364 aaKnown RBP4.95□□□□□ -1.62
LINC00458-202ENST00000427299 KRT3P12035 628 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 CCDC130P13994 396 aa4.95□□□□□ -1.62
LINC00458-202ENST00000427299 TPSB2P20231 275 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms