RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 H2AFZP0C0S5 128 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 CD46P15529 392 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 CD9P21926 228 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 LTBQ06643 244 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 TFDP2Q14188 446 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 CEBPEQ15744 281 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 DNAJC21Q5F1R6 531 aaKnown RBP13.46□□□□□ -0.25
HDAC6-206ENST00000426196 H2AFVQ71UI9 128 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 SIAH3Q8IW03 269 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 BEST3Q8N1M1 668 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 MDS2Q8NDY4 140 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 RNF25Q96BH1 459 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-206ENST00000426196 ZNF354BQ96LW1 612 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 APOL2Q9BQE5 337 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 TRIM51Q9BSJ1 452 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 GBA3Q9H227 469 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 DLL4Q9NR61 685 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 MKL2Q9ULH7 1088 aa13.46□□□□□ -0.25
HDAC6-206ENST00000426196 SLC5A10A0PJK1 596 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 ZNHIT1O43257 154 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 PECAM1P16284 738 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-206ENST00000426196 MSX1P28360 303 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 CHRNB4P30926 498 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 HSF1Q00613 529 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 TUBA3CQ13748 450 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 OR1C1Q15619 314 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 TAZQ16635 292 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 DBN1Q16643 649 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 ACER2Q5QJU3 275 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 FRMPD2BQ6IN97 320 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 TUBA3EQ6PEY2 450 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 RANBP10Q6VN20 620 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 DCUN1D3Q8IWE4 304 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 HORMAD2Q8N7B1 307 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 OR2L8Q8NGY9 312 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-206ENST00000426196 P3H4Q92791 437 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 MVB12AQ96EY5 273 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 SCMH1Q96GD3 660 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 DNAJC1Q96KC8 554 aaKnown RBP13.45□□□□□ -0.26
HDAC6-206ENST00000426196 CABS1Q96KC9 395 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 IMMP1LQ96LU5 166 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 C10orf90Q96M02 699 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 SIGLEC12Q96PQ1 595 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 UTP23Q9BRU9 249 aaKnown RBP13.45□□□□□ -0.26
HDAC6-206ENST00000426196 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
HDAC6-206ENST00000426196 HES7Q9BYE0 225 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 KCNJ16Q9NPI9 418 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 MKKSQ9NPJ1 570 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-206ENST00000426196 SLC39A10Q9ULF5 831 aa13.45□□□□□ -0.26
HDAC6-206ENST00000426196 RPH3AQ9Y2J0 694 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-206ENST00000426196 A0A0J9YVX5 310 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 NKX2-6A6NCS4 301 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 FFAR3O14843 346 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 GPR42O15529 346 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 CST8O60676 142 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 ANXA5P08758 320 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 HOXD4P09016 255 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-206ENST00000426196 PRSS56P0CW18 603 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 ZNF24P17028 368 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 ADRA1AP35348 466 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 TFF3Q07654 80 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 FIGNQ5HY92 759 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 FCRLBQ6BAA4 426 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 ITPRIPL1Q6GPH6 555 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 TMEM211Q6ICI0 200 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 TMEM205Q6UW68 189 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 NAPRTQ6XQN6 538 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 RBM43Q6ZSC3 357 aaKnown RBP13.44□□□□□ -0.26
HDAC6-206ENST00000426196 CEP128Q6ZU80 1094 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 BIVMQ86UB2 503 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 LMNTD1Q8N9Z9 388 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 METTL21AQ8WXB1 218 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 IL17FQ96PD4 163 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 QKIQ96PU8 341 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC6-206ENST00000426196 MENTQ9BUN1 341 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 RAB11FIP5Q9BXF6 653 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 TGIF2Q9GZN2 237 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 DNAJB12Q9NXW2 375 aaKnown RBP13.44□□□□□ -0.26
HDAC6-206ENST00000426196 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
HDAC6-206ENST00000426196 STOX2Q9P2F5 926 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-206ENST00000426196 CIDEBQ9UHD4 219 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 ST6GALNAC2Q9UJ37 374 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 EDARQ9UNE0 448 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 PRSS21Q9Y6M0 314 aa13.44□□□□□ -0.26
HDAC6-206ENST00000426196 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
HDAC6-206ENST00000426196 COL6A5A8TX70 2615 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 ZNF407Q9C0G0 2248 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 LOC105369274A0A096LPK9 316 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 LOC102723532A0A0G2JNH3 316 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 F8W8V4 182 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 H7C0S8 307 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 SEC24DO94855 1032 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-206ENST00000426196 SUN1O94901 812 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 OR56A5P0C7T3 313 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 C8orf89P0DMQ9 161 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 CSE1LP55060 971 aaKnown RBP13.43□□□□□ -0.26
HDAC6-206ENST00000426196 PRPSAP1Q14558 356 aa13.43□□□□□ -0.26
HDAC6-206ENST00000426196 ITIH4Q14624 930 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms