RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZBTB26Q9HCK0 441 aa15.16■□□□□ 0.02
SHOX2-202ENST00000425436 ZNF624Q9P2J8 865 aaPredicted RBP15.16■□□□□ 0.02
SHOX2-202ENST00000425436 ACSL5Q9ULC5 683 aa15.16■□□□□ 0.02
SHOX2-202ENST00000425436 PADI4Q9UM07 663 aa15.16■□□□□ 0.02
SHOX2-202ENST00000425436 OARD1Q9Y530 152 aa15.16■□□□□ 0.02
SHOX2-202ENST00000425436 COL5A1P20908 1838 aaPredicted RBP15.15■□□□□ 0.02
SHOX2-202ENST00000425436 SIX3O95343 332 aaPredicted RBP15.15■□□□□ 0.02
SHOX2-202ENST00000425436 ESRRBO95718 433 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 UROSP10746 265 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 CKMT1AP12532 417 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 CKMT2P17540 419 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 CSRP1P21291 193 aaKnown RBP15.15■□□□□ 0.02
SHOX2-202ENST00000425436 AOAHP28039 575 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 CPOXP36551 454 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 NOVA1P51513 510 aaKnown RBP15.15■□□□□ 0.02
SHOX2-202ENST00000425436 CDH13P55290 713 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 SYTL3Q4VX76 610 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 C14orf28Q4W4Y0 310 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 KANK2Q63ZY3 851 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 SULT1C3Q6IMI6 304 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 GUSBP11Q6P575 273 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 C16orf89Q6UX73 402 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 NET1Q7Z628 596 aaPredicted RBP15.15■□□□□ 0.02
SHOX2-202ENST00000425436 VRK3Q8IV63 474 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 PDPRQ8NCN5 879 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 TRPC4APQ8TEL6 797 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 AGAP11Q8TF27 550 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 C19orf60Q96EN9 201 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 INSM2Q96T92 566 aaPredicted RBP15.15■□□□□ 0.02
SHOX2-202ENST00000425436 HGH1Q9BTY7 390 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 TSR3Q9UJK0 312 aaKnown RBP15.15■□□□□ 0.02
SHOX2-202ENST00000425436 ASXL3Q9C0F0 2248 aa15.15■□□□□ 0.02
SHOX2-202ENST00000425436 RP1P56715 2156 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 LOC100653049A0A140TA62 436 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 SLC5A10A0PJK1 596 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 KLHL33A6NCF5 533 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 TMEM233B4DJY2 109 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 LIN7AO14910 233 aaPredicted RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 CASC3O15234 703 aaKnown RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 PPM1DO15297 605 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 TNFSF14O43557 240 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 SKAP2O75563 359 aaPredicted RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 KRT34O76011 436 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 ENO2P09104 434 aaPredicted RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 SDHBP21912 280 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 SLC19A1P41440 591 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 RPIAP49247 311 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 STX5Q13190 355 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 RPE65Q16518 533 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 TRMT5Q32P41 509 aaKnown RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 PLEKHS1Q5SXH7 462 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 DUS1LQ6P1R4 473 aaKnown RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 WASH2PQ6VEQ5 465 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 LARP4Q71RC2 724 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 C17orf82Q86X59 251 aaPredicted RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 ZNF761Q86XN6 746 aaPredicted RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 SFRP1Q8N474 314 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 TMEM159Q96B96 161 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 PPP1R36Q96LQ0 422 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 ZNF382Q96SR6 550 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 THTPAQ9BU02 230 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 TRIM54Q9BYV2 358 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 OR52A5Q9H2C5 316 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 DCLRE1BQ9H816 532 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 EFCAB1Q9HAE3 211 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 WASH6PQ9NQA3 447 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 DLL3Q9NYJ7 618 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 LRIT1Q9P2V4 623 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 PCTPQ9UKL6 214 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 IKZF3Q9UKT9 509 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 RNF215Q9Y6U7 377 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 CNOT1A5YKK6 2376 aaKnown RBP15.14■□□□□ 0.01
SHOX2-202ENST00000425436 SPTBN4Q9H254 2564 aa15.14■□□□□ 0.01
SHOX2-202ENST00000425436 SLC16A5O15375 505 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 KCNK5O95279 499 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 C8GP07360 202 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 GSTM1P09488 218 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 SLC35G4P0C7Q5 338 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 MPC1LP0DKB6 136 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 HALP42357 657 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 ACADVLP49748 655 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 STX1BP61266 288 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 SIM1P81133 766 aaPredicted RBP15.13■□□□□ 0.01
SHOX2-202ENST00000425436 GSTM4Q03013 218 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 BIRC2Q13490 618 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 PERM1Q5SV97 790 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 CAPRIN2Q6IMN6 1127 aaKnown RBP15.13■□□□□ 0.01
SHOX2-202ENST00000425436 SBSNQ6UWP8 590 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 CYHR1Q6ZMK1 362 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 NEK10Q6ZWH5 1172 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 PHC3Q8NDX5 983 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 IFI44Q8TCB0 444 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 ASZ1Q8WWH4 475 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 C12orf66Q96MD2 445 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 CATSPER2Q96P56 530 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 SERPINI1Q99574 410 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 DENND2DQ9H6A0 471 aaPredicted RBP15.13■□□□□ 0.01
SHOX2-202ENST00000425436 IMP3Q9NV31 184 aaKnown RBP15.13■□□□□ 0.01
SHOX2-202ENST00000425436 CPNE7Q9UBL6 633 aa15.13■□□□□ 0.01
SHOX2-202ENST00000425436 PTBP2Q9UKA9 531 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms