RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ALDH9A1P49189 494 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 PHEXP78562 749 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 INTS11Q5TA45 600 aaKnown RBP12.96□□□□□ -0.34
MCF2L-213ENST00000421756 GPR153Q6NV75 609 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 NOXRED1Q6NXP6 359 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 HORMAD1Q86X24 394 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 TMEM126BQ8IUX1 230 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 PLD3Q8IV08 490 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 TMEM132CQ8N3T6 1108 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 ZNF548Q8NEK5 533 aaPredicted RBP12.96□□□□□ -0.34
MCF2L-213ENST00000421756 RERGLQ9H628 205 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 AASDHPPTQ9NRN7 309 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 PDP1Q9P0J1 537 aaPredicted RBP12.96□□□□□ -0.34
MCF2L-213ENST00000421756 SNX6Q9UNH7 406 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 H7C0S8 307 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ELFN1P0C7U0 828 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 EPCAMP16422 314 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 POU1F1P28069 291 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 IRS1P35568 1242 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 NUDT6P53370 316 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CD47Q08722 323 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 DOC2AQ14183 400 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ZNF551Q7Z340 670 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 OR2A12Q8NGT7 310 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 UHRF1Q96T88 793 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 LHPPQ9H008 270 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 DNAJC11Q9NVH1 559 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 WDR70Q9NW82 654 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 SAMHD1Q9Y3Z3 626 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 MAP4K5Q9Y4K4 846 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ORC6Q9Y5N6 252 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 MGAT4DA6NG13 374 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 FADS2P1A8MWK0 482 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 H3BMQ9 156 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 RTCAO00442 366 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 YY2O15391 372 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 FADS2O95864 444 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 HNRNPCP07910 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 EBLN1P0CF75 366 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 MYOGP15173 224 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CYP2A7P20853 494 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CDK9P50750 372 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 HPCAP84074 193 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 MADCAM1Q13477 382 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CTU2Q2VPK5 515 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 USP39Q53GS9 565 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 PERM1Q5SV97 790 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 TCEAL8Q8IYN2 117 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 EID3Q8N140 333 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 COG8Q96MW5 612 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 TRIM39Q9HCM9 518 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 SCHIP1Q9P0W5 487 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 RIMKLBQ9ULI2 386 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ERVK-11Q9UQG0 969 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CCL27Q9Y4X3 112 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CCDC88CQ9P219 2028 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ARHGEF33A8MVX0 844 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 KPNA5O15131 536 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ANXA4P09525 319 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CD22P20273 847 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 AOAHP28039 575 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 IDH2P48735 452 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ALDH3A2P51648 485 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CCR3P51677 355 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 RPS26P62854 115 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 DCTN2Q13561 401 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 RAPSNQ13702 412 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 MAPK11Q15759 364 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ZNF284Q2VY69 593 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.95□□□□□ -0.342e-7■■■■□ 25.6
MCF2L-213ENST00000421756 ADCK2Q7Z695 626 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CRIPAKQ8N1N5 446 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 TNIP2Q8NFZ5 429 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 FIBINQ8TAL6 211 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 GAB3Q8WWW8 586 aa12.95□□□□□ -0.34
MCF2L-213ENST00000421756 CNOT11Q9UKZ1 510 aaKnown RBP12.95□□□□□ -0.34
MCF2L-213ENST00000421756 ARID1BQ8NFD5 2236 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 MMP20O60882 483 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 ALPLP05186 524 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 CTNNB1P35222 781 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 WDR5P61964 334 aaKnown RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 RAET1GQ6H3X3 334 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 THAP5Q7Z6K1 395 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 THOC6Q86W42 341 aaKnown RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 TDP1Q9NUW8 608 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 FAM118AQ9NWS6 357 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 FBXO10Q9UK96 956 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 SNX5Q9Y5X3 404 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 C16orf96A6NNT2 1141 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 CFAP99D6REC4 459 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 UPK1AO00322 258 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 NME6O75414 186 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 FUT4P22083 530 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 RPS13P62277 151 aaKnown RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 GANABQ14697 944 aaKnown RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 GALNT18Q6P9A2 607 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 AGTRAPQ6RW13 159 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms