RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TUBB8Q3ZCM7 444 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 AGAP7PQ5VUJ5 663 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 FRMPD2BQ6IN97 320 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 CES3Q6UWW8 571 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 TRIM58Q8NG06 486 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 AGAP4Q96P64 663 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 ZFYVE21Q9BQ24 234 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 WDR77Q9BQA1 342 aaPredicted RBP16.59■□□□□ 0.25
MSH6-203ENST00000420813 SOX17Q9H6I2 414 aaPredicted RBP16.59■□□□□ 0.25
MSH6-203ENST00000420813 ZNF304Q9HCX3 659 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 LZTFL1Q9NQ48 299 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 COPG1Q9Y678 874 aaKnown RBP16.59■□□□□ 0.25
MSH6-203ENST00000420813 NOTCH2Q04721 2471 aa16.59■□□□□ 0.25
MSH6-203ENST00000420813 DIDO1Q9BTC0 2240 aaKnown RBP16.58■□□□□ 0.25
MSH6-203ENST00000420813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.58■□□□□ 0.24
MSH6-203ENST00000420813 A0A0J9YVX5 310 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 TCRBV7S3A2A0A539 114 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 KRT87PA6NCN2 255 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 MYO1CO00159 1063 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 RNF224P0DH78 156 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 PAMP19021 973 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 CHRM3P20309 590 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 CARSP49589 748 aaKnown RBP16.58■□□□□ 0.24
MSH6-203ENST00000420813 KCNJ11Q14654 390 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 ARHGAP19Q14CB8 494 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 MUM1Q2TAK8 710 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 ANKRD20A4Q4UJ75 823 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 CUZD1Q86UP6 607 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 OR11G2Q8NGC1 345 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 OR9A1PQ8NGU1 263 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 LHPPQ9H008 270 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 FAM114A2Q9NRY5 505 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 ZC3H7BQ9UGR2 993 aaKnown RBP16.58■□□□□ 0.24
MSH6-203ENST00000420813 CRYL1Q9Y2S2 319 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 CACNA1DQ01668 2161 aa16.58■□□□□ 0.24
MSH6-203ENST00000420813 IGLV3-12A0A075B6K2 115 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 LOC105369274A0A096LPK9 316 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 LOC102723532A0A0G2JNH3 316 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 WIPF3A6NGB9 483 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 ARHGEF33A8MVX0 844 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 GOLGA8KD6RF30 607 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 GOLGA8TH3BQL2 631 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 CEP104O60308 925 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 PSIP1O75475 530 aaKnown RBP16.57■□□□□ 0.24
MSH6-203ENST00000420813 MED26O95402 600 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 PKMP14618 531 aaKnown RBP16.57■□□□□ 0.24
MSH6-203ENST00000420813 HSD17B2P37059 387 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 GLRBP48167 497 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 OCA2Q04671 838 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 FASTKQ14296 549 aaKnown RBP16.57■□□□□ 0.24
MSH6-203ENST00000420813 PRTGQ2VWP7 1150 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.57■□□□□ 0.24
MSH6-203ENST00000420813 SHISA6Q6ZSJ9 500 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 NEK10Q6ZWH5 1172 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 CILP2Q8IUL8 1156 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 OR4N4Q8N0Y3 316 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 METTL27Q8N6F8 245 aaPredicted RBP16.57■□□□□ 0.24
MSH6-203ENST00000420813 PRELID2Q8N945 189 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 STT3BQ8TCJ2 826 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 SMPDL3AQ92484 453 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 MVB12AQ96EY5 273 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 DPH7Q9BTV6 452 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 CRB3Q9BUF7 120 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 AGPAT4Q9NRZ5 378 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 INTS10Q9NVR2 710 aaKnown RBP16.57■□□□□ 0.24
MSH6-203ENST00000420813 ZNF282Q9UDV7 671 aaPredicted RBP16.57■□□□□ 0.24
MSH6-203ENST00000420813 NOVA2Q9UNW9 492 aaKnown RBP16.57■□□□□ 0.24
MSH6-203ENST00000420813 MAU2Q9Y6X3 613 aa16.57■□□□□ 0.24
MSH6-203ENST00000420813 CPAMD8Q8IZJ3 1885 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 ANKUB1A6NFN9 424 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 E5RI56 91 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 NRP2O60462 931 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 ALOX12BO75342 701 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 VPS26AO75436 327 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 HPP00738 406 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 CATP04040 527 aaKnown RBP16.56■□□□□ 0.24
MSH6-203ENST00000420813 ZGLP1P0C6A0 271 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 ERVK-10P10266 1014 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 TSFMP43897 325 aaKnown RBP16.56■□□□□ 0.24
MSH6-203ENST00000420813 KLC1Q07866 573 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 ELOAQ14241 798 aaKnown RBP16.56■□□□□ 0.24
MSH6-203ENST00000420813 KLHL38Q2WGJ6 581 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 ACSBG2Q5FVE4 666 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 B3GNTL1Q67FW5 361 aaPredicted RBP16.56■□□□□ 0.24
MSH6-203ENST00000420813 NEPROQ6NW34 567 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 FBXO42Q6P3S6 717 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 CENPUQ71F23 418 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 DTWD1Q8N5C7 304 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 MIEF2Q96C03 454 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 C10orf90Q96M02 699 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 PLCD4Q9BRC7 762 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 ACAT2Q9BWD1 397 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 EPS8L2Q9H6S3 715 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 MRPS30Q9NP92 439 aaKnown RBP16.56■□□□□ 0.24
MSH6-203ENST00000420813 UTP6Q9NYH9 597 aaKnown RBP16.56■□□□□ 0.24
MSH6-203ENST00000420813 SAMD15Q9P1V8 674 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 KLHL42Q9P2K6 505 aa16.56■□□□□ 0.24
MSH6-203ENST00000420813 ERRFI1Q9UJM3 462 aaPredicted RBP16.56■□□□□ 0.24
MSH6-203ENST00000420813 CDC14AQ9UNH5 594 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms