RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 ZFYVE21Q9BQ24 234 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 NPLQ9BXD5 320 aaPredicted RBP4.03□□□□□ -1.76
PTPN22-202ENST00000420377 GSX2Q9BZM3 304 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 SPNS1Q9H2V7 528 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 GAL3ST2Q9H3Q3 398 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 MFSD1Q9H3U5 465 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 ESRP2Q9H6T0 727 aaKnown RBP4.03□□□□□ -1.76
PTPN22-202ENST00000420377 HMG20AQ9NP66 347 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 ABCC13Q9NSE7 274 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 BABAM2Q9NXR7 383 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 SMARCAL1Q9NZC9 954 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 ANAPC2Q9UJX6 822 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 CA14Q9ULX7 337 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 ERVW-1Q9UQF0 538 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 TP53TG5Q9Y2B4 290 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 MRPS2Q9Y399 296 aaKnown RBP4.03□□□□□ -1.76
PTPN22-202ENST00000420377 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.03□□□□□ -1.76
PTPN22-202ENST00000420377 MSRB2Q9Y3D2 182 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 RNF215Q9Y6U7 377 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 HSPE1-MOB4S4R3N1 261 aa4.03□□□□□ -1.76
PTPN22-202ENST00000420377 FRMPD2Q68DX3 1309 aaPredicted RBP4.03□□□□□ -1.77
PTPN22-202ENST00000420377 SMIM35A0A1B0GVV1 85 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 C9orf170A2RU37 121 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 GRID2IPA4D2P6 1211 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 PGPEP1LA6NFU8 196 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CLDN25C9JDP6 229 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 F5H0A9 414 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 HTRA2O43464 458 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 SOX30O94993 753 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 SPDEFO95238 335 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 PRAMEF12O95522 483 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 NDST3O95803 873 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 IL1AP01583 271 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CSF2P04141 144 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 RALBP11234 206 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CEACAM1P13688 526 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 GSPT1P15170 499 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CD36P16671 472 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 DDX6P26196 483 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ARNTP27540 789 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 MAGEA1P43355 309 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 NSFP46459 744 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CDKN1BP46527 198 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 HSF2Q03933 536 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 GALNT2Q10471 571 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 SMAD1Q15797 465 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ADIPOQQ15848 244 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 DUOXA2Q1HG44 320 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 TYSND1Q2T9J0 566 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 TRMT5Q32P41 509 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CHRFAM7AQ494W8 412 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 KIAA1755Q5JYT7 1200 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 EXOSC6Q5RKV6 272 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 LCN1P1Q5VSP4 162 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CCDC137Q6PK04 289 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 RAD9BQ6WBX8 426 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 BHLHA15Q7RTS1 189 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 DDX53Q86TM3 631 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 SLCO6A1Q86UG4 719 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 VSIG10LQ86VR7 867 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 TRIM69Q86WT6 500 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 PPP1R3BQ86XI6 285 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 PLCZ1Q86YW0 608 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 TMC8Q8IU68 726 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ARID3BQ8IVW6 561 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 METTL4Q8N3J2 472 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 KYQ8NBH2 561 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 SLC7A14Q8TBB6 771 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ACTRT1Q8TDG2 376 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ELP5Q8TE02 316 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CREB3L4Q8TEY5 395 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CASKIN2Q8WXE0 1202 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ING5Q8WYH8 240 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 SNAPC3Q92966 411 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 RILPL2Q969X0 211 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 BOD1Q96IK1 185 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 PPP3R2Q96LZ3 170 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CLUHP3Q96NS8 147 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ZBTB18Q99592 522 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 CITED2Q99967 270 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 LRRC1Q9BTT6 524 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 HSD3B7Q9H2F3 369 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ZMAT3Q9HA38 289 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 FOLH1BQ9HBA9 442 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 FBRSL1Q9HCM7 1045 aaKnown RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 DCP1AQ9NPI6 582 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ITM2CQ9NQX7 267 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 RNF146Q9NTX7 359 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 SPATA6Q9NWH7 488 aaPredicted RBP4.02□□□□□ -1.77
PTPN22-202ENST00000420377 TMEM161AQ9NX61 479 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ACTR10Q9NZ32 417 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 TREM2Q9NZC2 230 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 RNF14Q9UBS8 474 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 WASF3Q9UPY6 502 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 MGAT4BQ9UQ53 548 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 NUBP2Q9Y5Y2 271 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 MYH7BA7E2Y1 1941 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 A0A1W2PPH5 198 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 TCRBV5S4A2TA0A5A2 114 aa4.02□□□□□ -1.77
PTPN22-202ENST00000420377 ARHGAP42A6NI28 874 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms