RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TSPAN33Q86UF1 283 aa2.58□□□□□ -2
VPS41-206ENST00000418457 CCDC190Q86UF4 302 aa2.58□□□□□ -2
VPS41-206ENST00000418457 ODF3L1Q8IXM7 274 aa2.58□□□□□ -2
VPS41-206ENST00000418457 LMNTD2Q8IXW0 634 aa2.58□□□□□ -2
VPS41-206ENST00000418457 RNF113BQ8IZP6 322 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 MYOCDQ8IZQ8 938 aa2.58□□□□□ -2
VPS41-206ENST00000418457 HJURPQ8NCD3 748 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 THAP6Q8TBB0 222 aa2.58□□□□□ -2
VPS41-206ENST00000418457 HM13Q8TCT9 377 aa2.58□□□□□ -2
VPS41-206ENST00000418457 TRPC4APQ8TEL6 797 aa2.58□□□□□ -2
VPS41-206ENST00000418457 DUSP19Q8WTR2 217 aa2.58□□□□□ -2
VPS41-206ENST00000418457 SLC20A1Q8WUM9 679 aa2.58□□□□□ -2
VPS41-206ENST00000418457 UBLCP1Q8WVY7 318 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 RAPGEF5Q92565 580 aa2.58□□□□□ -2
VPS41-206ENST00000418457 ABTB1Q969K4 478 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 PIGTQ969N2 578 aa2.58□□□□□ -2
VPS41-206ENST00000418457 FAM120BQ96EK7 910 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 DTNBP1Q96EV8 351 aa2.58□□□□□ -2
VPS41-206ENST00000418457 CDCA5Q96FF9 252 aa2.58□□□□□ -2
VPS41-206ENST00000418457 FAM84BQ96KN1 310 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 IL17FQ96PD4 163 aa2.58□□□□□ -2
VPS41-206ENST00000418457 OR2A14Q96R47 310 aa2.58□□□□□ -2
VPS41-206ENST00000418457 NUDCD1Q96RS6 583 aa2.58□□□□□ -2
VPS41-206ENST00000418457 GAD1Q99259 594 aa2.58□□□□□ -2
VPS41-206ENST00000418457 FMO2Q99518 471 aa2.58□□□□□ -2
VPS41-206ENST00000418457 SPZ1Q9BXG8 430 aa2.58□□□□□ -2
VPS41-206ENST00000418457 C1QTNF1Q9BXJ1 281 aa2.58□□□□□ -2
VPS41-206ENST00000418457 MAK16Q9BXY0 300 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 CRNKL1Q9BZJ0 848 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 TMEM39BQ9GZU3 492 aa2.58□□□□□ -2
VPS41-206ENST00000418457 NT5C3AQ9H0P0 336 aa2.58□□□□□ -2
VPS41-206ENST00000418457 CARD9Q9H257 536 aa2.58□□□□□ -2
VPS41-206ENST00000418457 DDX31Q9H8H2 851 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 C6orf50Q9HD87 102 aa2.58□□□□□ -2
VPS41-206ENST00000418457 FAM207AQ9NSI2 230 aaPredicted RBP2.58□□□□□ -2
VPS41-206ENST00000418457 INTS9Q9NV88 658 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 BARHL2Q9NY43 387 aa2.58□□□□□ -2
VPS41-206ENST00000418457 MAP3K20Q9NYL2 800 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 CPSF2Q9P2I0 782 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 TBC1D29Q9UFV1 150 aa2.58□□□□□ -2
VPS41-206ENST00000418457 FAM153AQ9UHL3 310 aa2.58□□□□□ -2
VPS41-206ENST00000418457 BAIAP2L1Q9UHR4 511 aa2.58□□□□□ -2
VPS41-206ENST00000418457 TRMT112Q9UI30 125 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 ZNF580Q9UK33 172 aa2.58□□□□□ -2
VPS41-206ENST00000418457 PADI1Q9ULC6 663 aa2.58□□□□□ -2
VPS41-206ENST00000418457 PADI3Q9ULW8 664 aa2.58□□□□□ -2
VPS41-206ENST00000418457 NENFQ9UMX5 172 aa2.58□□□□□ -2
VPS41-206ENST00000418457 CMAHPQ9Y471 501 aa2.58□□□□□ -2
VPS41-206ENST00000418457 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.58□□□□□ -2
VPS41-206ENST00000418457 FLT1P17948 1338 aa2.58□□□□□ -2
VPS41-206ENST00000418457 ROBO3Q96MS0 1386 aa2.58□□□□□ -2
VPS41-206ENST00000418457 NAV1Q8NEY1 1877 aa2.58□□□□□ -2
VPS41-206ENST00000418457 LOXHD1Q8IVV2 1947 aa2.58□□□□□ -2
VPS41-206ENST00000418457 ABCA3Q99758 1704 aa2.57□□□□□ -2
VPS41-206ENST00000418457 GTPBP10A4D1E9 387 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 LILRA5A6NI73 299 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TSPY2A6NKD2 308 aa2.57□□□□□ -2
VPS41-206ENST00000418457 AGAP14A8MT82 685 aa2.57□□□□□ -2
VPS41-206ENST00000418457 CDRT15L2A8MXV6 281 aa2.57□□□□□ -2
VPS41-206ENST00000418457 FAM90A26D6RGX4 464 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ZNF587BE7ETH6 402 aa2.57□□□□□ -2
VPS41-206ENST00000418457 NDC80O14777 642 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ANKRD28O15084 1053 aa2.57□□□□□ -2
VPS41-206ENST00000418457 CETN3O15182 167 aa2.57□□□□□ -2
VPS41-206ENST00000418457 SMAD9O15198 467 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 RGS16O15492 202 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 BUB1O43683 1085 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PRKAB2O43741 272 aa2.57□□□□□ -2
VPS41-206ENST00000418457 CALUO43852 315 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 SNX3O60493 162 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PRDM1O75626 825 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TSPAN9O75954 239 aa2.57□□□□□ -2
VPS41-206ENST00000418457 TPPPO94811 219 aa2.57□□□□□ -2
VPS41-206ENST00000418457 KCNK5O95279 499 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ANP32DO95626 131 aa2.57□□□□□ -2
VPS41-206ENST00000418457 OAS1P00973 400 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 PLEKP08567 350 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 SNRNP70P08621 437 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 GSTA2P09210 222 aa2.57□□□□□ -2
VPS41-206ENST00000418457 H2AFZP0C0S5 128 aa2.57□□□□□ -2
VPS41-206ENST00000418457 MYOD1P15172 320 aa2.57□□□□□ -2
VPS41-206ENST00000418457 NQO1P15559 274 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 FERP16591 822 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ITGB6P18564 788 aa2.57□□□□□ -2
VPS41-206ENST00000418457 UGT1A1P22309 533 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PAX7P23759 505 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PON1P27169 355 aa2.57□□□□□ -2
VPS41-206ENST00000418457 CHRNA3P32297 505 aa2.57□□□□□ -2
VPS41-206ENST00000418457 MSH2P43246 934 aa2.57□□□□□ -2
VPS41-206ENST00000418457 KLK7P49862 253 aa2.57□□□□□ -2
VPS41-206ENST00000418457 GPR143P51810 404 aa2.57□□□□□ -2
VPS41-206ENST00000418457 HADHBP55084 474 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 CLDN20P56880 219 aa2.57□□□□□ -2
VPS41-206ENST00000418457 PTENP60484 403 aa2.57□□□□□ -2
VPS41-206ENST00000418457 MAGOHP61326 146 aaKnown RBP2.57□□□□□ -2
VPS41-206ENST00000418457 MAP2K1Q02750 393 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 CAV1Q03135 178 aa2.57□□□□□ -2
VPS41-206ENST00000418457 RELQ04864 619 aaPredicted RBP2.57□□□□□ -2
VPS41-206ENST00000418457 STK4Q13043 487 aa2.57□□□□□ -2
VPS41-206ENST00000418457 ZBTB17Q13105 803 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms