RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 VPS29Q9UBQ0 182 aa11.37□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 GNG14A0A1W2PPG7 69 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 DIRAS1O95057 198 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SRCP12931 536 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PFKLP17858 780 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 AOAHP28039 575 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FMO3P31513 532 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 DNAJA1P31689 397 aaKnown RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CDKN2CP42773 168 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ISL1P61371 349 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PHC1P78364 1004 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ABRQ12979 859 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RAPSNQ13702 412 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 C22orf39Q6P5X5 142 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ELMSAN1Q6PJG2 1045 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RBM23Q86U06 439 aaKnown RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SVOPQ8N4V2 548 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TTC29Q8NA56 475 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ASB11Q8WXH4 323 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FOPNLQ96NB1 174 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 VN1R3Q9BXE9 311 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PALMDQ9NP74 551 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 THG1LQ9NWX6 298 aaKnown RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 B4GALT6Q9UBX8 382 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZNF197O14709 1029 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MITFO75030 526 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 XYLBO75191 536 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 INMTO95050 263 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 NTRK1P04629 796 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 NNMTP40261 264 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 LSM3P62310 102 aaKnown RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CDK5R2Q13319 367 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SP140Q13342 867 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 VMACQ2NL98 169 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CTU2Q2VPK5 515 aaKnown RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 GGTA1PQ4G0N0 100 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MPP7Q5T2T1 576 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CPZQ66K79 652 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 Q6ZNX1 250 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TCEAL8Q8IYN2 117 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TRUB1Q8WWH5 349 aaKnown RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ATL1Q8WXF7 558 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FAM83DQ9H4H8 585 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ADPRHL2Q9NX46 363 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SH3BP4Q9P0V3 963 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CLEC4EQ9ULY5 219 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RUVBL1Q9Y265 456 aaKnown RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 OR2AG2A6NM03 316 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 GRM6O15303 877 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 NUAK1O60285 661 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 BMP1P13497 986 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 KDELR2P33947 212 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RYKP34925 604 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CTSOP43234 321 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 NPTX1Q15818 432 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PLEKHS1Q5SXH7 462 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 Q6ZNB5 142 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 DPY19L3Q6ZPD9 716 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FAM43BQ6ZT52 329 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RFLNAQ6ZTI6 216 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 MSANTD1Q6ZTZ1 278 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TMEM179BQ7Z7N9 219 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SERPINA11Q86U17 422 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SLCO6A1Q86UG4 719 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZSWIM9Q86XI8 627 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SLC15A4Q8N697 577 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZNF641Q96N77 438 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 LYSMD1Q96S90 227 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 P2RY13Q9BPV8 354 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 IL1RAPQ9NPH3 570 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SPG21Q9NZD8 308 aa11.36□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CLDN25C9JDP6 229 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SLC16A6O15403 523 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 AOC2O75106 756 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 BCAS1O75363 584 aaPredicted RBP11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 B3GALT4O96024 378 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CATP04040 527 aaKnown RBP11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 AMD1P17707 334 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 IL1RNP18510 177 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 EFNA1P20827 205 aaPredicted RBP11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 FPR1P21462 350 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SPINT3P49223 89 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PSMD7P51665 324 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 PTSQ03393 145 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CBX2Q14781 532 aaPredicted RBP11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZNF284Q2VY69 593 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CARD16Q5EG05 197 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 ZC3H12BQ5HYM0 836 aaKnown RBP11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 NEK5Q6P3R8 708 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CALHM3Q86XJ0 350 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TRIT1Q9H3H1 467 aaKnown RBP11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 CCNB1IP1Q9NPC3 277 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 SERHLQ9NQF3 203 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 RASSF1Q9NS23 344 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 NEUROG3Q9Y4Z2 214 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 TRBV5-3A0A0A0MS03 114 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 A0A1W2PQ67 120 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 UPK3BL1B0FP48 263 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 UPK3BL2E5RIL1 263 aa11.35□□□□□ -0.59
CSPG4P3Y-201ENST00000418188 AREL1O15033 823 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms