RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ASB5Q8WWX0 329 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CPT1BQ92523 772 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PSMG2Q969U7 264 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 RTP4Q96DX8 246 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CFAP36Q96G28 342 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 P2RY11Q96G91 374 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC39A13Q96H72 371 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF845Q96IR2 970 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CELF6Q96J87 481 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 LYZL4Q96KX0 146 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 PPP1R2P1Q96PQ5 205 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 KLHL5Q96PQ7 755 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 VAT1Q99536 393 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 LGMNQ99538 433 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 SELENOSQ9BQE4 189 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ABHD14AQ9BUJ0 271 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ELOVL1Q9BW60 279 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 BRD8Q9H0E9 1235 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 XAB2Q9HCS7 855 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ASAH2Q9NR71 780 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 THSD1Q9NS62 852 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 OSER1Q9NX31 292 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 WWOXQ9NZC7 414 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 NINJ2Q9NZG7 142 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 IL37Q9NZH6 218 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 UTS2RQ9UKP6 389 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 CHMP2BQ9UQN3 213 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 LZTS1Q9Y250 596 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ASB3Q9Y575 518 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANKRD36A6QL64 1941 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 SRCAPQ6ZRS2 3230 aa3.79□□□□□ -1.8
HMGB3P20-201ENST00000417997 TRBV5-3A0A0A0MS03 114 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM234BA2RU67 622 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 LINC01553A4QN01 128 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF840PA6NDX5 716 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 C5orf60A6NFR6 353 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF814B7Z6K7 855 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 RASA4BC9J798 803 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 I6L893 689 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 J3KTA2 159 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 KCNK1O00180 336 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 RASGRF2O14827 1237 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCL16O15467 120 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRPF4O43172 522 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 PSMD3O43242 534 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 RASA4O43374 803 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 COCHO43405 550 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 BANF1O75531 89 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 SPAG6O75602 509 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 METTL18O95568 372 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 FGF19O95750 216 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 TTC4O95801 387 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 TBX18O95935 607 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 IGLV3-27P01718 113 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 SHBGP04278 402 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 RB1P06400 928 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 RHOCP08134 193 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ABHD2P08910 425 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZDHHC11BP0C7U3 371 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 T-ENOLP0DO92 83 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 HMGA1P17096 107 aaKnown RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 EGR1P18146 543 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 NR1D1P20393 614 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCNCP24863 283 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 PTPN3P26045 913 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 IVDP26440 423 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 GABRB3P28472 473 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 OR1E1P30953 314 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 HPDP32754 393 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 STX2P32856 288 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLCO1A2P46721 670 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF84P51523 738 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 NDST2P52849 883 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 GEMP55040 296 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 YBEYP58557 167 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 CDK16Q00536 496 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 GABPB1Q06547 395 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF33AQ06730 810 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 NSUN2Q08J23 767 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 EIF4EBP2Q13542 120 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF235Q14590 738 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 TMED2Q15363 201 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 KYNUQ16719 465 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 LONRF1Q17RB8 773 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC5A9Q2M3M2 681 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 PARP6Q2NL67 630 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 KLHL38Q2WGJ6 581 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCDC38Q502W7 563 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 TTMPQ5BVD1 217 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 SNX30Q5VWJ9 437 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 KCTD16Q68DU8 428 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 IL31Q6EBC2 164 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 NAPEPLDQ6IQ20 393 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 CASC4Q6P4E1 433 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 MEPCEQ7L2J0 689 aaKnown RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 TAOK1Q7L7X3 1001 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 DNAJB7Q7Z6W7 309 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 RASGRP3Q8IV61 690 aa3.78□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF567Q8N184 647 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms