RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 KIR3DX1Q9H7L2 352 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 MVB12BQ9H7P6 319 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 IPPKQ9H8X2 491 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 ERVMER34-1Q9H9K5 563 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 IL21RQ9HBE5 538 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SLC40A1Q9NP59 571 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 MID1IP1Q9NPA3 183 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 DNAJC11Q9NVH1 559 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SPHK1Q9NYA1 384 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 OPTCQ9UBM4 332 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 SLC22A14Q9Y267 594 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 CCL27Q9Y4X3 112 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 TNPO3Q9Y5L0 923 aaKnown RBP6.61□□□□□ -1.35
CPS1-202ENST00000417946 DNAJC15Q9Y5T4 150 aa6.61□□□□□ -1.35
CPS1-202ENST00000417946 WDFY4Q6ZS81 3184 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 TRBV23OR9-2A0A075B6M9 112 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 IGKV1-8A0A0C4DH67 115 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 LY6G6EA0A0G2JKS1 128 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 LMO7DNF2Z398 122 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 IFRD1O00458 451 aaPredicted RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 NDUFAB1O14561 156 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 MSTNO14793 375 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 AZIN1O14977 448 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 YY2O15391 372 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 SDC3O75056 442 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 WDR47O94967 919 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 SNUPNO95149 360 aaKnown RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 EPN2O95208 641 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 HIST1H2AGP0C0S8 130 aaPredicted RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 PRR35P0CG20 571 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 KITP10721 976 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 NEFHP12036 1026 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 CD1EP15812 388 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 XRCC1P18887 633 aaPredicted RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 HIST1H2ADP20671 130 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 MAP4P27816 1152 aaKnown RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 EPHA8P29322 1005 aaPredicted RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 SERPINB3P29508 390 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 CASP2P42575 452 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 MAP2K3P46734 347 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 IDH3AP50213 366 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 RAB28P51157 221 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 AQP5P55064 265 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 PKNOX1P55347 436 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 MAZP56270 477 aaKnown RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 NAA20P61599 178 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 POU4F2Q12837 409 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 BNIP3Q12983 259 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 GRIK2Q13002 908 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 CDC16Q13042 620 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 GPR18Q14330 331 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 ARHGAP19Q14CB8 494 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 GGTA1PQ4G0N0 100 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 CFAP157Q5JU67 520 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 ADNP2Q6IQ32 1131 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 ZC3H14Q6PJT7 736 aaKnown RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 OGFOD3Q6PK18 319 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 SUSD1Q6UWL2 747 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 C6orf89Q6UWU4 347 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 RNF165Q6ZSG1 346 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 CPLX4Q7Z7G2 160 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 CRLF3Q8IUI8 442 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 SYT12Q8IV01 421 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 ADGRF3Q8IZF5 1079 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 C2orf73Q8N5S3 287 aaPredicted RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 KYQ8NBH2 561 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 OR2A1Q8NGT9 310 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 OR2I1PQ8NGU4 316 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 OR2L8Q8NGY9 312 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 OR2T11Q8NH01 316 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 LMX1AQ8TE12 382 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 ATL1Q8WXF7 558 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 PIGKQ92643 395 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 NEIL2Q969S2 332 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 GTPBP3Q969Y2 492 aaKnown RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 HIST1H2AHQ96KK5 128 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 OR52B2Q96RD2 323 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 FERD3LQ96RJ6 166 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 HIST1H2AJQ99878 128 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 H2AFJQ9BTM1 129 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 NUSAP1Q9BXS6 441 aaKnown RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 TRIM54Q9BYV2 358 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 ILKAPQ9H0C8 392 aaPredicted RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 WDR55Q9H6Y2 383 aaPredicted RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 MEAF6Q9HAF1 191 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 SLC6A20Q9NP91 592 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 KCNK4Q9NYG8 393 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 CPNE7Q9UBL6 633 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 GIMAP2Q9UG22 337 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 TRPS1Q9UHF7 1281 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 DCTN4Q9UJW0 460 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 TDRKHQ9Y2W6 561 aaKnown RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 RNF11Q9Y3C5 154 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 TRAF6Q9Y4K3 522 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 TIMM22Q9Y584 194 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 R4GN57 208 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 U3KQA8 63 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 RALGAPA1Q6GYQ0 2036 aa6.6□□□□□ -1.35
CPS1-202ENST00000417946 ASCC3Q8N3C0 2202 aaKnown RBP6.6□□□□□ -1.35
CPS1-202ENST00000417946 USP34Q70CQ2 3546 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms