RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OR2A25A4D2G3 310 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 KLHL18O94889 574 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 ZGLP1P0C6A0 271 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 ARNTP27540 789 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 CCNFP41002 786 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 NPY2RP49146 381 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 CARSP49589 748 aaKnown RBP14.14□□□□□ -0.15
RPS28-201ENST00000417088 EIF3BP55884 814 aaKnown RBP14.14□□□□□ -0.15
RPS28-201ENST00000417088 OCA2Q04671 838 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 CDC16Q13042 620 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 FASTKQ14296 549 aaKnown RBP14.14□□□□□ -0.15
RPS28-201ENST00000417088 TLR1Q15399 786 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 SIX1Q15475 284 aaPredicted RBP14.14□□□□□ -0.15
RPS28-201ENST00000417088 B3GNTL1Q67FW5 361 aaPredicted RBP14.14□□□□□ -0.15
RPS28-201ENST00000417088 PRMT9Q6P2P2 845 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 FBXO42Q6P3S6 717 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 ISLR2Q6UXK2 745 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 LINC00696Q6ZRV3 163 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 PRSS58Q8IYP2 241 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 FAR1Q8WVX9 515 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 MIEF2Q96C03 454 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 C10orf90Q96M02 699 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 FOPNLQ96NB1 174 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 BIRC8Q96P09 236 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 IL22Q9GZX6 179 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 ZNF160Q9HCG1 818 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 SPATA7Q9P0W8 599 aa14.14□□□□□ -0.15
RPS28-201ENST00000417088 IGLV3-12A0A075B6K2 115 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 LRRTM2O43300 516 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 VAPBO95292 243 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 MATN4O95460 622 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 HPP00738 406 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 EIF2S1P05198 315 aaKnown RBP14.13□□□□□ -0.15
RPS28-201ENST00000417088 EDN3P14138 238 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 ACPPP15309 386 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 FMO4P31512 558 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 MFAP5Q13361 173 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 GBX1Q14549 363 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 CCNG2Q16589 344 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 PRTGQ2VWP7 1150 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 VWA2Q5GFL6 755 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 ATG9BQ674R7 924 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 CES3Q6UWW8 571 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 LAPTM4BQ86VI4 370 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 ZGRF1Q86YA3 2104 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 CATSPER1Q8NEC5 780 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 MAGEC3Q8TD91 643 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 C8orf44Q96CB5 159 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 LMF1Q96S06 567 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 ZFYVE21Q9BQ24 234 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 DPH7Q9BTV6 452 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 KIFC1Q9BW19 673 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 ACAT2Q9BWD1 397 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 BFARQ9NZS9 450 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 ZNF282Q9UDV7 671 aaPredicted RBP14.13□□□□□ -0.15
RPS28-201ENST00000417088 TSR3Q9UJK0 312 aaKnown RBP14.13□□□□□ -0.15
RPS28-201ENST00000417088 C3orf18Q9UK00 162 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 OSGIN2Q9Y236 505 aa14.13□□□□□ -0.15
RPS28-201ENST00000417088 AP3B1O00203 1094 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 MAP2K7O14733 419 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 NIPSNAP2O75323 286 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 ERGP11308 486 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 FBLP22087 321 aaKnown RBP14.12□□□□□ -0.15
RPS28-201ENST00000417088 MGAT1P26572 445 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 CMPK1P30085 196 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 BASP1P80723 227 aaKnown RBP14.12□□□□□ -0.15
RPS28-201ENST00000417088 TYSND1Q2T9J0 566 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 MUM1Q2TAK8 710 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.12□□□□□ -0.15
RPS28-201ENST00000417088 RPUSD3Q6P087 351 aaKnown RBP14.12□□□□□ -0.15
RPS28-201ENST00000417088 DRICH1Q6PGQ1 229 aaPredicted RBP14.12□□□□□ -0.15
RPS28-201ENST00000417088 SDCCAG8Q86SQ7 713 aaPredicted RBP14.12□□□□□ -0.15
RPS28-201ENST00000417088 OTUD6BQ8N6M0 293 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 OR9A1PQ8NGU1 263 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 PSMF1Q92530 271 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 LPGAT1Q92604 370 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 MFSD3Q96ES6 412 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 SYNPO2LQ9H987 977 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 GALPQ9UBC7 116 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 GUCA1BQ9UMX6 200 aa14.12□□□□□ -0.15
RPS28-201ENST00000417088 DRG1Q9Y295 367 aaKnown RBP14.12□□□□□ -0.15
RPS28-201ENST00000417088 ARHGEF33A8MVX0 844 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 GOLGA8KD6RF30 607 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 H0YGG7 62 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 GOLGA8TH3BQL2 631 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 ERVK-10P10266 1014 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 ATP5DP30049 168 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 EMP3P54852 163 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 ARF3P61204 181 aaPredicted RBP14.11□□□□□ -0.15
RPS28-201ENST00000417088 NAA25Q14CX7 972 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 RPS6KA1Q15418 735 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 ANKRD20A4Q4UJ75 823 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 ACSBG2Q5FVE4 666 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 MEI1Q5TIA1 1274 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 CROCCQ5TZA2 2017 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 MRNIPQ6NTE8 343 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 SUSD1Q6UWL2 747 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 C4orf22Q6V702 233 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 NDUFAF7Q7L592 441 aa14.11□□□□□ -0.15
RPS28-201ENST00000417088 KBTBD2Q8IY47 623 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms