RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 LRRC70Q7Z2Q7 622 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 FBXO39Q8N4B4 442 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 ABHD11Q8NFV4 315 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 ZNF285Q96NJ3 590 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 SLC46A1Q96NT5 459 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 EGFL8Q99944 293 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 TMEM79Q9BSE2 394 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 C1QTNF3Q9BXJ4 246 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 CAPS2Q9BXY5 557 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 VIPAS39Q9H9C1 493 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 PDE7BQ9NP56 450 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 SSU72Q9NP77 194 aaKnown RBP11.47□□□□□ -0.57
ATG4B-207ENST00000415107 COPG2Q9UBF2 871 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 CIDEBQ9UHD4 219 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 TAC3Q9UHF0 121 aa11.47□□□□□ -0.57
ATG4B-207ENST00000415107 TNPO3Q9Y5L0 923 aaKnown RBP11.47□□□□□ -0.57
ATG4B-207ENST00000415107 SNRNP200O75643 2136 aaKnown RBP11.47□□□□□ -0.57
ATG4B-207ENST00000415107 A0A1W2PPM1 405 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 MED19A0JLT2 244 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 SLC9B1P1A6NJY1 282 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 NVLO15381 856 aaKnown RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 TAPBPO15533 448 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 STK16O75716 305 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 GUCA1CO95843 209 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 TOP3BO95985 862 aaKnown RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 SBK3P0C264 359 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 FGF3P11487 239 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 FGF5P12034 268 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 EZRP15311 586 aaKnown RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 NPPBP16860 134 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 MAGP20916 626 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 MPSTP25325 297 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 PSMB5P28074 263 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 GRIA3P42263 894 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 ERVPABLB-1P60509 514 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 PCBP2Q15366 365 aaKnown RBP eCLIP11.46□□□□□ -0.571e-6■■■■■ 27.4
ATG4B-207ENST00000415107 KRT71Q3SY84 523 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 CCDC153Q494R4 210 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 SUSD1Q6UWL2 747 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 DNAJC22Q8N4W6 341 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 PPFIBP2Q8ND30 876 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 OR4K1Q8NGD4 311 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 RDH11Q8TC12 318 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 GATA6Q92908 595 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 APOPT1Q96IL0 206 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 PPM1MQ96MI6 270 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 OR4K3Q96R72 315 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 TAAR9Q96RI9 348 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 PLCD4Q9BRC7 762 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 ASPSCR1Q9BZE9 553 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 UNKQ9C0B0 810 aaKnown RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 PITHD1Q9GZP4 211 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 ATG10Q9H0Y0 220 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 EHD1Q9H4M9 534 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 SLC6A20Q9NP91 592 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 MRPS30Q9NP92 439 aaKnown RBP11.46□□□□□ -0.57
ATG4B-207ENST00000415107 ASCL3Q9NQ33 180 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 TMEM184CQ9NVA4 438 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 ZNF358Q9NW07 568 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 WWOXQ9NZC7 414 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 KLHL3Q9UH77 587 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 GRID1Q9ULK0 1009 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 SNX7Q9UNH6 387 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 SATB2Q9UPW6 733 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 KCNE2Q9Y6J6 123 aa11.46□□□□□ -0.57
ATG4B-207ENST00000415107 KCNE1BA0A087WTH5 132 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 TLDC2A0PJX2 215 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 SMIM23A6NLE4 172 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 EFCAB7A8K855 629 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 SUPT3HB4E1H0 165 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 H3BMH7 237 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 UBXN8O00124 270 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 TK2O00142 265 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 RGS16O15492 202 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-207ENST00000415107 SUPT3HO75486 399 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 S100BP04271 92 aaPredicted RBP11.45□□□□□ -0.58
ATG4B-207ENST00000415107 CAPNS1P04632 268 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 JMJD7P0C870 316 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 KRT4P19013 534 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 GNAZP19086 355 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 GLRBP48167 497 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 PIK3CGP48736 1102 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 NAA20P61599 178 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 GABREP78334 506 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 CDC16Q13042 620 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 ZIC1Q15915 447 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 ZC3H12BQ5HYM0 836 aaKnown RBP11.45□□□□□ -0.58
ATG4B-207ENST00000415107 C3orf38Q5JPI3 329 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 SNAP47Q5SQN1 464 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 CEP85LQ5SZL2 805 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 FCRL6Q6DN72 434 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 FIGLAQ6QHK4 219 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 CEACAM20Q6UY09 585 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 CDHR3Q6ZTQ4 885 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 TAX1BP1Q86VP1 789 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 THOC6Q86W42 341 aaKnown RBP11.45□□□□□ -0.58
ATG4B-207ENST00000415107 PAQR7Q86WK9 346 aa11.45□□□□□ -0.58
ATG4B-207ENST00000415107 C17orf64Q86WR6 236 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms