RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CPNE9Q8IYJ1 553 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 SLC22A15Q8IZD6 547 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 SLC25A45Q8N413 288 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 EEF1AKMT1Q8WVE0 214 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 GATA6Q92908 595 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 EXT2Q93063 718 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 TMEM159Q96B96 161 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 NR1H4Q96RI1 486 aaPredicted RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 ATOH8Q96SQ7 321 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 NPAS2Q99743 824 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 GSDMCQ9BYG8 508 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 OR52A5Q9H2C5 316 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 DPEP2Q9H4A9 486 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 TFB2MQ9H5Q4 396 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 SYTL2Q9HCH5 934 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 WASH6PQ9NQA3 447 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 FAM86C1Q9NVL1 165 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 UTP6Q9NYH9 597 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 SPASTQ9UBP0 616 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 TBC1D29Q9UFV1 150 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 ACSL5Q9ULC5 683 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 FAM186AA6NE01 2351 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 DPPA5A6NC42 116 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 PROB1E7EW31 1015 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 PSMD12O00232 456 aaPredicted RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 KHNYNO15037 678 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 CFLARO15519 480 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 MATN4O95460 622 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 SYPP08247 313 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 GIMD1P0DJR0 217 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 CTSEP14091 401 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 TSPAN8P19075 237 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 IDSP22304 550 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 DGKAP23743 735 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 ACADLP28330 430 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 ARRB1P49407 418 aaPredicted RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 PKNOX1P55347 436 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 BNIP3Q12983 259 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 FASTKQ14296 549 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 ELOCQ15369 112 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 TRIP10Q15642 601 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 TTLL9Q3SXZ7 439 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 LPCAT4Q643R3 524 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 TCEAL6Q6IPX3 200 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 ABRAXAS1Q6UWZ7 409 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 NEK10Q6ZWH5 1172 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 KANSL1Q7Z3B3 1105 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 NKAPQ8N5F7 415 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 PTGR2Q8N8N7 351 aaPredicted RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 ZNF548Q8NEK5 533 aaPredicted RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 TCEAL3Q969E4 200 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 SPDL1Q96EA4 605 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 C19orf60Q96EN9 201 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 NUSAP1Q9BXS6 441 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 MRPL1Q9BYD6 325 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 KLHL4Q9C0H6 718 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 VCXQ9H320 206 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 IL21RQ9HBE5 538 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 UCKL1Q9NWZ5 548 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 FAM8A1Q9UBU6 413 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 SCOCQ9UIL1 159 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 PSMD13Q9UNM6 376 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 WDR37Q9Y2I8 494 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 CSNK1G3Q9Y6M4 447 aa9.66□□□□□ -0.86
DDB1-202ENST00000414411 ASCC3Q8N3C0 2202 aaKnown RBP9.66□□□□□ -0.86
DDB1-202ENST00000414411 GVINP1Q7Z2Y8 2422 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 MAGEA13PA6NCF6 341 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 LMO7DNF2Z398 122 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 H3BM21 787 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 STX16-NPEPL1H3BU86 382 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 UBXN8O00124 270 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 YY2O15391 372 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 AQP9O43315 295 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 KERAO60938 352 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 SIX3O95343 332 aaPredicted RBP9.65□□□□□ -0.86
DDB1-202ENST00000414411 EML2O95834 649 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 LINGO3P0C6S8 592 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 ENGP17813 658 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 TGM1P22735 817 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 ME2P23368 584 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 RPL10P27635 214 aaKnown RBP9.65□□□□□ -0.86
DDB1-202ENST00000414411 ACTR1BP42025 376 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 ATP4BP51164 291 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 CDH13P55290 713 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 ACTR1AP61163 376 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 SH3BP2P78314 561 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 MS4A2Q01362 244 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 STX5Q13190 355 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 TCEA2Q15560 299 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 LRRC36Q1X8D7 754 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 UAP1L1Q3KQV9 507 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 UGT3A2Q3SY77 523 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 SFT2D3Q587I9 215 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 ZFP1Q6P2D0 407 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 SLC30A9Q6PML9 568 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 LARP4Q71RC2 724 aaKnown RBP eCLIP9.65□□□□□ -0.86
DDB1-202ENST00000414411 RAB44Q7Z6P3 723 aaPredicted RBP9.65□□□□□ -0.86
DDB1-202ENST00000414411 PQLC1Q8N2U9 271 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 SAP25Q8TEE9 199 aa9.65□□□□□ -0.86
DDB1-202ENST00000414411 KIAA1191Q96A73 305 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms