RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 THOP1P52888 689 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 BCAT1P54687 386 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 RPL10AP62906 217 aaKnown RBP9.15□□□□□ -0.94
SNHG3-201ENST00000413987 MROH9Q5TGP6 573 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 AFTPHQ6ULP2 937 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 MINDY2Q8NBR6 621 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 PDPRQ8NCN5 879 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 AKR7LQ8NHP1 331 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 POC1BQ8TC44 478 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 STARD8Q92502 1023 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 HSH2DQ96JZ2 352 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 SORT1Q99523 831 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 ACBD6Q9BR61 282 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 ZBED2Q9BTP6 218 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 EFHD1Q9BUP0 239 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 C1orf50Q9BV19 199 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 DUSP16Q9BY84 665 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 DRC3Q9H069 523 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 C10orf88Q9H8K7 445 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 NECTIN3Q9NQS3 549 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 PRDM9Q9NQV7 894 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 ERGIC3Q9Y282 383 aa9.15□□□□□ -0.94
SNHG3-201ENST00000413987 TMEM189-UBE2V1I3L0A0 370 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A9O60656 530 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 GJB5O95377 273 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 ADH1CP00326 375 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 GSRP00390 522 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 FYNP06241 537 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 LIPFP07098 398 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 TFPTP0C1Z6 253 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 CLUP10909 449 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 RALBP11234 206 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 HOXB1P14653 301 aaPredicted RBP9.15□□□□□ -0.95
SNHG3-201ENST00000413987 ACPPP15309 386 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A6P19224 532 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A1P22309 533 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A4P22310 534 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 GLDCP23378 1020 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 DCKP27707 260 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 PIK3R1P27986 724 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 GRNP28799 593 aaKnown RBP9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A3P35503 534 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A5P35504 534 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 MLLT6P55198 1093 aaPredicted RBP9.15□□□□□ -0.95
SNHG3-201ENST00000413987 PITX1P78337 314 aaPredicted RBP9.15□□□□□ -0.95
SNHG3-201ENST00000413987 MTM1Q13496 603 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 SMTNL2Q2TAL5 461 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 N4BP2L1Q5TBK1 243 aaPredicted RBP9.15□□□□□ -0.95
SNHG3-201ENST00000413987 NANOGP8Q6NSW7 305 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 FAM171BQ6P995 826 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 HFE2Q6ZVN8 426 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 TPRA1Q86W33 373 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 MCUQ8NE86 351 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 PCDH19Q8TAB3 1148 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 FBXO32Q969P5 355 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 IGSF21Q96ID5 467 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF512Q96ME7 567 aaPredicted RBP9.15□□□□□ -0.95
SNHG3-201ENST00000413987 GAL3ST4Q96RP7 486 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 DCUN1D5Q9BTE7 237 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 RPF2Q9H7B2 306 aaKnown RBP9.15□□□□□ -0.95
SNHG3-201ENST00000413987 LRRC40Q9H9A6 602 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 EFCAB1Q9HAE3 211 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A7Q9HAW7 530 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A10Q9HAW8 530 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 UGT1A8Q9HAW9 530 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 WWOXQ9NZC7 414 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 SAE1Q9UBE0 346 aaPredicted RBP9.15□□□□□ -0.95
SNHG3-201ENST00000413987 TRPS1Q9UHF7 1281 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 DPP7Q9UHL4 492 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 NLRC5Q86WI3 1866 aa9.15□□□□□ -0.95
SNHG3-201ENST00000413987 KIAA1671Q9BY89 1806 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 GOLGA8QA0A0J9YX86 632 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 C7orf72A4D263 438 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 GOLGA8OA6NCC3 632 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 TMEM114B3SHH9 223 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 GOLGA8NF8WBI6 632 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 GFRA2O00451 464 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 LSM1O15116 133 aaKnown RBP9.14□□□□□ -0.95
SNHG3-201ENST00000413987 ZMPSTE24O75844 475 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 VNN2O95498 520 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 OXSR1O95747 527 aaPredicted RBP9.14□□□□□ -0.95
SNHG3-201ENST00000413987 LINC00271P0C7V0 271 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 CPB1P15086 417 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 AVPR2P30518 371 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 PCGF2P35227 344 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 MAGEA6P43360 314 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 TUFMP49411 452 aaKnown RBP9.14□□□□□ -0.95
SNHG3-201ENST00000413987 NME5P56597 212 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 VBP1P61758 197 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 PPIGQ13427 754 aaKnown RBP eCLIP9.14□□□□□ -0.954e-13■■■■□ 20.7
SNHG3-201ENST00000413987 ART3Q13508 389 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 PCLAFQ15004 111 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 C3orf38Q5JPI3 329 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 ATAD3BQ5T9A4 648 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 GRTP1Q5TC63 336 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 IRAK1BP1Q5VVH5 260 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 THEM5Q8N1Q8 247 aa9.14□□□□□ -0.95
SNHG3-201ENST00000413987 FIBCD1Q8N539 461 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms