RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 EXOC3L1Q86VI1 746 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 THOC6Q86W42 341 aaKnown RBP29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 TCAIMQ8N3R3 496 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 SLC41A2Q96JW4 573 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 SLC6A20Q9NP91 592 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 SOHLH2Q9NX45 425 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 LOXL2Q9Y4K0 774 aa29.45■■■□□ 2.3
CSNK1E-206ENST00000413574 HGSO14964 777 aaPredicted RBP29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 WDR47O94967 919 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 ADRB1P08588 477 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 CCL4P13236 92 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 GGT5P36269 586 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 GRIA3P42263 894 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 C3orf38Q5JPI3 329 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 FOXR1Q6PIV2 292 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 FAM129CQ86XR2 697 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 FBXO39Q8N4B4 442 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 AGBL5Q8NDL9 886 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 APOPT1Q96IL0 206 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 SMC6Q96SB8 1091 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 MRPS30Q9NP92 439 aaKnown RBP29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 CUEDC1Q9NWM3 386 aaPredicted RBP29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 SATB2Q9UPW6 733 aa29.44■■■□□ 2.3
CSNK1E-206ENST00000413574 CCDC187A0A096LP49 1063 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 IGKV1-8A0A0C4DH67 115 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 LRRC14BA6NHZ5 514 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 KLK8O60259 260 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 NELFEP18615 380 aaKnown RBP29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 CCND1P24385 295 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 CMPK1P30085 196 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 FCRL6Q6DN72 434 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 CARFQ8N187 725 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 C19orf47Q8N9M1 422 aaKnown RBP29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 PHF21BQ96EK2 531 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 CMKLR1Q99788 373 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 DPH7Q9BTV6 452 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 FAM60AQ9NP50 221 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 GRID1Q9ULK0 1009 aa29.43■■■□□ 2.3
CSNK1E-206ENST00000413574 ITIH1P19827 911 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 ARL4DP49703 201 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 HSD11B2P80365 405 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 FIGLAQ6QHK4 219 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 LCTLQ6UWM7 567 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 PTGR2Q8N8N7 351 aaPredicted RBP29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 GRAMD1AQ96CP6 724 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 CD244Q9BZW8 370 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 TMBIM4Q9HC24 238 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 EFCAB7A8K855 629 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 SASH3O75995 380 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 EBLN1P0CF75 366 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 ALDH18A1P54886 795 aaKnown RBP29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 SETDB1Q15047 1291 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 PCBD2Q9H0N5 130 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 CNOT10Q9H9A5 744 aaKnown RBP29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 MKS1Q9NXB0 559 aa29.42■■■□□ 2.3
CSNK1E-206ENST00000413574 CCNT2O60583 730 aaKnown RBP29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 SMIM24O75264 130 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 STK16O75716 305 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 SIX3O95343 332 aaPredicted RBP29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 PROCP04070 461 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 FGF3P11487 239 aaPredicted RBP29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 FOLR1P15328 257 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 ETV5P41161 510 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 CAMK2BQ13554 666 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 KMT5CQ86Y97 462 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 KLHDC8AQ8IYD2 350 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 D2HGDHQ8N465 521 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 ZNF446Q9NWS9 450 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 SENP1Q9P0U3 644 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 BTRCQ9Y297 605 aa29.41■■■□□ 2.3
CSNK1E-206ENST00000413574 GOLGA6L10A6NI86 522 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 HCRTR1O43613 425 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 PLIN3O60664 434 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 C17orf64Q86WR6 236 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 WDR36Q8NI36 951 aaKnown RBP29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 NEIL2Q969S2 332 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 HAUS8Q9BT25 410 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 VIPAS39Q9H9C1 493 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 PDE7BQ9NP56 450 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 SIDT1Q9NXL6 827 aaKnown RBP29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 AKAP7Q9P0M2 348 aaPredicted RBP29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 SLC17A7Q9P2U7 560 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 PLLPQ9Y342 182 aa29.4■■■□□ 2.3
CSNK1E-206ENST00000413574 MED19A0JLT2 244 aaPredicted RBP29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 A8MT66 165 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 H7BY64 318 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 DLX3O60479 287 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 CCNDBP1O95273 360 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 CDH1P12830 882 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 MLLT3P42568 568 aaPredicted RBP29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 ABATP80404 500 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 BMPERQ8N8U9 685 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 UBTD2Q8WUN7 234 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 PRAP1Q96NZ9 151 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 IQCGQ9H095 443 aaKnown RBP29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 PISDQ9UG56 409 aa29.39■■■□□ 2.3
CSNK1E-206ENST00000413574 PLD2O14939 933 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 IPO13O94829 963 aaKnown RBP29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 FKBP9O95302 570 aa29.38■■■□□ 2.29
CSNK1E-206ENST00000413574 FOXM1Q08050 763 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms