RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 LKAAEAR1Q8TD35 194 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 CDK5RAP1Q96SZ6 601 aaKnown RBP17.14■□□□□ 0.33
SDCBP-202ENST00000413219 C19orf43Q9BQ61 176 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 GPR63Q9BZJ6 419 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 RASSF1Q9NS23 344 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 VPS51Q9UID3 782 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 PPT2Q9UMR5 302 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 OR6C75A6NL08 312 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 FAM47E-STBD1D6RA91 191 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 hCG_2039718K7EN88 272 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 FZD6O60353 706 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 DUSP11O75319 330 aaKnown RBP17.14■□□□□ 0.33
SDCBP-202ENST00000413219 DLGAP3O95886 979 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 C9P02748 559 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 AKR1A1P14550 325 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 RPS24P62847 133 aaKnown RBP17.14■□□□□ 0.33
SDCBP-202ENST00000413219 CAMK2GQ13555 558 aaPredicted RBP17.14■□□□□ 0.33
SDCBP-202ENST00000413219 GGTA1PQ4G0N0 100 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 CTXN3Q4LDR2 81 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 TPRG1LQ5T0D9 272 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 SLX4IPQ5VYV7 408 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 ZCCHC8Q6NZY4 707 aaKnown RBP17.14■□□□□ 0.33
SDCBP-202ENST00000413219 GLB1LQ6UWU2 654 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 SLC46A3Q7Z3Q1 461 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 ANKRD46Q86W74 232 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 ZNF280BQ86YH2 543 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 DNASE1L2Q92874 299 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 MYDGFQ969H8 173 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 CMTM7Q96FZ5 175 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 EPYCQ99645 322 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 COPS4Q9BT78 406 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 ZBTB20Q9HC78 741 aaPredicted RBP17.14■□□□□ 0.33
SDCBP-202ENST00000413219 SPATA7Q9P0W8 599 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 PSORS1C1Q9UIG5 152 aa17.14■□□□□ 0.33
SDCBP-202ENST00000413219 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-202ENST00000413219 M0R082 166 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 CBX4O00257 560 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 SLC25A14O95258 325 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-202ENST00000413219 PDYNP01213 254 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 PXNP49023 591 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-202ENST00000413219 MTAPQ13126 283 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 SLC14A1Q13336 389 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 ZNF177Q13360 481 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-202ENST00000413219 PTPRRQ15256 657 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 DUOXA1Q1HG43 343 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 FBXO43Q4G163 708 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 GNASQ5JWF2 1037 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 GPRC6AQ5T6X5 926 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 LYPLAL1Q5VWZ2 237 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 CXCL17Q6UXB2 119 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 P3H2Q8IVL5 708 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 SLC7A5P1Q8MH63 180 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 CEP44Q9C0F1 390 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 FKBP14Q9NWM8 211 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 THUMPD1Q9NXG2 353 aaKnown RBP17.13■□□□□ 0.33
SDCBP-202ENST00000413219 GPRC5BQ9NZH0 403 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 RBMX2Q9Y388 322 aaKnown RBP17.13■□□□□ 0.33
SDCBP-202ENST00000413219 AP1M2Q9Y6Q5 423 aa17.13■□□□□ 0.33
SDCBP-202ENST00000413219 RGS13O14921 159 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 HAT1O14929 419 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SNX4O95219 450 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 KCNK5O95279 499 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 IGHA2P01877 340 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 GPX2P18283 190 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 ITGB6P18564 788 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SDC1P18827 310 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 GADD45AP24522 165 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 S100A5P33763 92 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 CASP3P42574 277 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 TEKQ02763 1124 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 BOP1Q14137 746 aaKnown RBP17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SYT16Q17RD7 645 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 TIGD6Q17RP2 521 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 INO80DQ53TQ3 878 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-202ENST00000413219 EID2BQ96D98 161 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 HSH2DQ96JZ2 352 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 B3GALT6Q96L58 329 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 TSSK3Q96PN8 268 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 PTPN18Q99952 460 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 DNMT3LQ9UJW3 386 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SNX6Q9UNH7 406 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 PCDHGA6Q9Y5G7 932 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 TRBV5-4A0A0C4DH59 114 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 CLIC1O00299 241 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 GAPDHSO14556 408 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-202ENST00000413219 PGLSO95336 258 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 PRAMEF1O95521 474 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 RPLP0P05388 317 aaKnown RBP17.12■□□□□ 0.33
SDCBP-202ENST00000413219 KIR3DL1P43629 444 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 VEZF1Q14119 521 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 MRPL58Q14197 206 aaKnown RBP17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SF3B4Q15427 424 aaKnown RBP eCLIP17.12■□□□□ 0.336e-7■■■■■ 30.8
SDCBP-202ENST00000413219 MACC1Q6ZN28 852 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 GPR155Q7Z3F1 870 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 SELENOMQ8WWX9 145 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 UBE2FQ969M7 185 aa17.12■□□□□ 0.33
SDCBP-202ENST00000413219 MTFMTQ96DP5 389 aaKnown RBP17.12■□□□□ 0.33
SDCBP-202ENST00000413219 CCDC97Q96F63 343 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-202ENST00000413219 ZNF486Q96H40 463 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms