RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 BNIP1Q12981 228 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 C1orf61Q13536 156 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 DOC2AQ14183 400 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 GPR18Q14330 331 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SLBPQ14493 270 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS41-204ENST00000413141 KRT72Q14CN4 511 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 ELOCQ15369 112 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 TEAD4Q15561 434 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 ZRSR2Q15696 482 aaKnown RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 PLK5Q496M5 336 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 LACTB2Q53H82 288 aaPredicted RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 CATSPEREQ5SY80 951 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 THEMIS2Q5TEJ8 643 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 PEAR1Q5VY43 1037 aaPredicted RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 FRG2Q64ET8 278 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 ATG9BQ674R7 924 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 OGFOD2Q6N063 350 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 IYDQ6PHW0 289 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SCIMPQ6UWF3 145 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 NXPE4Q6UWF7 544 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 CHSY3Q70JA7 882 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 TREML1Q86YW5 311 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SFTPA2Q8IWL1 248 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 TRIM48Q8IWZ4 208 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 NAGSQ8N159 534 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SFRP1Q8N474 314 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 FBXL6Q8N531 539 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 C2orf73Q8N5S3 287 aaPredicted RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 CPSF7Q8N684 471 aaKnown RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 ZNF548Q8NEK5 533 aaPredicted RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 WDR20Q8TBZ3 569 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SLC37A2Q8TED4 501 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SETD7Q8WTS6 366 aaKnown RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 PATE1Q8WXA2 126 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 JPH3Q8WXH2 748 aaPredicted RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 NELL1Q92832 810 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 TUBGCP3Q96CW5 907 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 FRG2BQ96QU4 278 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 EFCAB11Q9BUY7 163 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 ACPTQ9BZG2 426 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 TWSG1Q9GZX9 223 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 PCBD2Q9H0N5 130 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 ELOVL6Q9H5J4 265 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 AKTIPQ9H8T0 292 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 PELI2Q9HAT8 420 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SLC40A1Q9NP59 571 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 PFDN4Q9NQP4 134 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 FARSBQ9NSD9 589 aaKnown RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 RIC8BQ9NVN3 520 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SPASTQ9UBP0 616 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 SUSD2Q9UGT4 822 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 ZNF490Q9ULM2 529 aaPredicted RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 SNX6Q9UNH7 406 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 CCL27Q9Y4X3 112 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 COPG1Q9Y678 874 aaKnown RBP6.42□□□□□ -1.38
VPS41-204ENST00000413141 CAPN7Q9Y6W3 813 aa6.42□□□□□ -1.38
VPS41-204ENST00000413141 TRBV23OR9-2A0A075B6M9 112 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 A0A1B0GVT2 93 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SERTM1A2A2V5 107 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 FAM221BA6H8Z2 402 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 OR5K4A6NMS3 321 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SLC28A1O00337 649 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SLC22A2O15244 555 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 AQP9O43315 295 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 RGS14O43566 566 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 HRO43593 1189 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 PRICKLE3O43900 615 aaPredicted RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 SDC3O75056 442 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 PEX11AO75192 247 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 PIAS2O75928 621 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 RSL1D1O76021 490 aaKnown RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 UNC5CO95185 931 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 CBX6O95503 412 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 VIPP01282 170 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 CHRM5P08912 532 aaPredicted RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 C1GALT1C1LP0DN25 315 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 GNSP15586 552 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 LBPP18428 481 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 PRPH2P23942 346 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 CTSKP43235 329 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ATP4BP51164 291 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 NEK2P51955 445 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 HNRNPKP61978 463 aaKnown RBP eCLIP6.41□□□□□ -1.38
VPS41-204ENST00000413141 ERVK-8P63133 956 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 YBX1P67809 324 aaKnown RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 REEP5Q00765 189 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 HMGCS1Q01581 520 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 BNC1Q01954 994 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ZNF33BQ06732 778 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 CSTF3Q12996 717 aaKnown RBP6.41□□□□□ -1.38
VPS41-204ENST00000413141 SQLEQ14534 574 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 PLCL1Q15111 1095 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 NR6A1Q15406 480 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ZNF423Q2M1K9 1284 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ZNF528Q3MIS6 628 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ATP6AP1LQ52LC2 224 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 SGO1Q5FBB7 561 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 PAGE2BQ5JRK9 111 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ICE2Q659A1 982 aa6.41□□□□□ -1.38
VPS41-204ENST00000413141 ADNP2Q6IQ32 1131 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms