RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CRTC1Q6UUV9 634 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 LRRC74BQ6ZQY2 392 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 NET1Q7Z628 596 aaPredicted RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ADGRE4PQ86SQ3 457 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 GKN2Q86XP6 184 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 MYLK4Q86YV6 388 aaPredicted RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 NDUFAF2Q8N183 169 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 SDR16C5Q8N3Y7 309 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 KIF2BQ8N4N8 673 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 TEX26Q8N6G2 289 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 STPG3Q8N7X2 389 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PLA2G15Q8NCC3 412 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PCDH19Q8TAB3 1148 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 RAB3IL1Q8TBN0 382 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 OR1E3Q8WZA6 343 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ZNF75CPQ92670 426 aaPredicted RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 NAT6Q93015 286 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 FUBP1Q96AE4 644 aaKnown RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 DGCR14Q96DF8 476 aaKnown RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 NUS1Q96E22 293 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PDXPQ96GD0 296 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 COQ10AQ96MF6 247 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 TSGA13Q96PP4 275 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 BTBD9Q96Q07 612 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 DEPDC7Q96QD5 511 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 OR14A2Q96R54 314 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 NDNQ99608 321 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 SEMA3CQ99985 751 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 ZNF670Q9BS34 389 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 BOCQ9BWV1 1114 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 CADM1Q9BY67 442 aaKnown RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 POLR1EQ9GZS1 481 aaKnown RBP5.2□□□□□ -1.58
LINC00342-201ENST00000412393 GOLPH3Q9H4A6 298 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 KCTD5Q9NXV2 234 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 TAS2R1Q9NYW7 299 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 NINJ2Q9NZG7 142 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 MOSPD1Q9UJG1 213 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 STK38LQ9Y2H1 464 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PCDHB1Q9Y5F3 818 aa5.2□□□□□ -1.58
LINC00342-201ENST00000412393 PTPRQQ9UMZ3 2332 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 CACNA1GO43497 2377 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 A0A087WV48 116 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 NPIPB15A6NHN6 443 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 PSMD11O00231 422 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 CASQ2O14958 399 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 TLX3O43711 291 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 BRINP1O60477 761 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 USP12O75317 370 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 PDHA1P08559 390 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 HOXC4P09017 264 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 ZNF888P0CJ79 500 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 MYCLP1P12525 358 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 KRT10P13645 584 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 CREB1P16220 341 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 FAHP16930 419 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 CTPS1P17812 591 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 TGM2P21980 687 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 KDELR1P24390 212 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 CCNCP24863 283 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 GCAP28676 217 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 TRIM23P36406 574 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 EPHB1P54762 984 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 ACTR3P61158 418 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 GABREP78334 506 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 DSC2Q02487 901 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 GBE1Q04446 702 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 SLC10A2Q12908 348 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 PTPRRQ15256 657 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 KYNUQ16719 465 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 LONRF1Q17RB8 773 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 RNF151Q2KHN1 245 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 ISXQ2M1V0 245 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 MUM1Q2TAK8 710 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 ACSBG2Q5FVE4 666 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 LRRC38Q5VT99 294 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 RNF220Q5VTB9 566 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 PNCKQ6P2M8 343 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 RBM44Q6ZP01 1051 aaKnown RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 Q6ZVL8 140 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 USP45Q70EL2 814 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 HSD11B1LQ7Z5J1 315 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 TAF8Q7Z7C8 310 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 TSPAN33Q86UF1 283 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 HEATR4Q86WZ0 1026 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 LSMEM2Q8N112 164 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 PELI3Q8N2H9 469 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 CBARPQ8N350 705 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 PQLC3Q8N755 202 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 CCNYQ8ND76 341 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 FAM46DQ8NEK8 389 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 OR56A4Q8NGH8 313 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 WDR48Q8TAF3 677 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 SNRNP27Q8WVK2 155 aaKnown RBP5.19□□□□□ -1.58
LINC00342-201ENST00000412393 PIH1D2Q8WWB5 315 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 NRG4Q8WWG1 115 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 FGF11Q92914 225 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 FATE1Q969F0 183 aa5.19□□□□□ -1.58
LINC00342-201ENST00000412393 FAF2Q96CS3 445 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms