RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-229	ENST00000411527	GRIA1	P42261	906 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	EMP2	P54851	167 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ACVR1	Q04771	509 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MUM1	Q2TAK8	710 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CCSMST1	Q4G0I0	132 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PTRHD1	Q6GMV3	140 aa	Known RBP	13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SIRT6	Q8N6T7	355 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	LRRC57	Q8N9N7	239 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	OR2L3	Q8NG85	312 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	OR2A1	Q8NGT9	310 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SKA2	Q8WVK7	121 aa	Predicted RBP	13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	HAS2	Q92819	552 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	YIPF2	Q9BWQ6	316 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TSPY26P	Q9H489	355 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ETNK1	Q9HBU6	452 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	AMFR	Q9UKV5	643 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	NFS1	Q9Y697	457 aa		13.58	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	APC	P25054	2843 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	IGLV3-12	A0A075B6K2	115 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TCRBV7S2A1N4T	A0A589	114 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	GRID2IP	A4D2P6	1211 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	KRT87P	A6NCN2	255 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SOWAHD	A6NJG2	315 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PRMT5	O14744	637 aa	Predicted RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	WFS1	O76024	890 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	UNC5C	O95185	931 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	C1orf105	O95561	183 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SERPINA7	P05543	415 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ERVK-10	P10266	1014 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	FDXR	P22570	491 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	BDKRB1	P46663	353 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SRSF11	Q05519	484 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	EEF1A2	Q05639	463 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	KLF1	Q13351	362 aa	Predicted RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	INA	Q16352	499 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	AARS2	Q5JTZ9	985 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	FAAH2	Q6GMR7	532 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	FBXO42	Q6P3S6	717 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CNST	Q6PJW8	725 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TMEM207	Q6UWW9	146 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RNF44	Q7L0R7	432 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PEX26	Q7Z412	305 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	UBL4B	Q8N7F7	174 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MRFAP1L1	Q96HT8	127 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CABS1	Q96KC9	395 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TRIM5	Q9C035	493 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	LACRT	Q9GZZ8	138 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CATSPERZ	Q9NTU4	200 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TRPC4	Q9UBN4	977 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SUCO	Q9UBS9	1254 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CDC14A	Q9UNH5	594 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RUVBL2	Q9Y230	463 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MRPS2	Q9Y399	296 aa	Known RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	KLK4	Q9Y5K2	254 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MRFAP1	Q9Y605	127 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CPAMD8	Q8IZJ3	1885 aa		13.57	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527		A0A1W2PPV9	198 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	BTNL10	A8MVZ5	291 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	IDS	B3KWA1	339 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527		E7EVH7	732 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CCL21	O00585	134 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	FFAR3	O14843	346 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	KPNA5	O15131	536 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CD3EAP	O15446	510 aa	Known RBP	13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	GPR42	O15529	346 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SUN1	O94901	812 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	IPO7	O95373	1038 aa	Known RBP	13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	BMP10	O95393	424 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CELA2A	P08217	269 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	STIP1	P31948	543 aa	Known RBP	13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TTPA	P49638	278 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	YBX1	P67809	324 aa	Known RBP	13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MRGPRG	Q86SM5	289 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	HMGCLL1	Q8TB92	370 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CCDC120	Q96HB5	630 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	C10orf90	Q96M02	699 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PANX3	Q96QZ0	392 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ZFYVE21	Q9BQ24	234 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	DPH7	Q9BTV6	452 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	ACAT2	Q9BWD1	397 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	TCAF1	Q9Y4C2	921 aa		13.56	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	IGHV1-45	A0A0A0MS14	117 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	OR2A25	A4D2G3	310 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527		H0YGG7	62 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	RASAL1	O95294	804 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	WDPCP	O95876	746 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	IFNB1	P01574	187 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CRYAB	P02511	175 aa	Known RBP	13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	HEXB	P07686	556 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	SNRPB2	P08579	225 aa	Known RBP	13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	PTMS	P20962	102 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	MST1	P26927	711 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	HTR1E	P28566	365 aa		13.55	□□□□□ -0.24
HLA-DQB2-229	ENST00000411527	CMPK1	P30085	196 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms