RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 PLEKHA7Q6IQ23 1121 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 TIGD7Q6NT04 549 aaPredicted RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 TEPPQ6URK8 271 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 WASH2PQ6VEQ5 465 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 SPNS3Q6ZMD2 512 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 FAM83HQ6ZRV2 1179 aaPredicted RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 BZW1Q7L1Q6 419 aaKnown RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 APTXQ7Z2E3 356 aaKnown RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 ZNF571Q7Z3V5 609 aaPredicted RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 RAB43Q86YS6 212 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 TRAPPC5Q8IUR0 188 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 RBM12BQ8IXT5 1001 aaKnown RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 RAVER1Q8IY67 606 aaKnown RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 GALNT16Q8N428 558 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 NIPA2Q8N8Q9 360 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 CLEC1AQ8NC01 280 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 OR1L3Q8NH93 324 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 ARRDC2Q8TBH0 407 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 PHOSPHO1Q8TCT1 267 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 PPP4R1Q8TF05 950 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 TEKT4Q8WW24 435 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 CPT1BQ92523 772 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 MAML1Q92585 1016 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 GLYATL1Q969I3 302 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 LRRC45Q96CN5 670 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 CLIP3Q96DZ5 547 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 NAP1L5Q96NT1 182 aaPredicted RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 CSPG4P5Q96PW8 444 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 SLX1AQ9BQ83 275 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 WDR77Q9BQA1 342 aaPredicted RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 SYT11Q9BT88 431 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 SPATA16Q9BXB7 569 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 XPO4Q9C0E2 1151 aaKnown RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 POLR1EQ9GZS1 481 aaKnown RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 HSD3B7Q9H2F3 369 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 ACTR5Q9H9F9 607 aaPredicted RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 PCDH9Q9HC56 1237 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 TRIM39Q9HCM9 518 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 AGPAT4Q9NRZ5 378 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 KCND1Q9NSA2 647 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 ABHD10Q9NUJ1 306 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 PKD2L2Q9NZM6 624 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 CTTNBP2NLQ9P2B4 639 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 NFKBIL1Q9UBC1 381 aaPredicted RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 MYO1AQ9UBC5 1043 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 MYOTQ9UBF9 498 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 ANAPC7Q9UJX3 599 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 TMPRSS11EQ9UL52 423 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 PSMD13Q9UNM6 376 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 BTRCQ9Y297 605 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 TTLL3Q9Y4R7 772 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 CFAP20Q9Y6A4 193 aaKnown RBP4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 CCDC168Q8NDH2 2452 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 PKDREJQ9NTG1 2253 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 ANKRD12Q6UB98 2062 aa4.33□□□□□ -1.72
RNU4-25P-201ENST00000410569 A0A1B0GUH1 482 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 UBA6A0AVT1 1052 aaPredicted RBP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 CCDC78A2IDD5 438 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 MROH6A6NGR9 719 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 C9orf118A6NHY6 69 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 TMEM150CB9EJG8 249 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 C9J4A7 227 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 DDX3XO00571 662 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 LDB2O43679 373 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 VEGFDO43915 354 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 MFAP3LO75121 409 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 IPO13O94829 963 aaKnown RBP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 PLATP00750 562 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 GYPCP04921 128 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 UMODP07911 640 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 MTHFD1P11586 935 aaKnown RBP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 ST6GAL1P15907 406 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 ZFXP17010 805 aaPredicted RBP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 BPIP17213 487 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 CYP2A7P20853 494 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 IDSP22304 550 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 PBLDP30039 288 aaPredicted RBP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 PBX1P40424 430 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 HALP42357 657 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 TSFMP43897 325 aaKnown RBP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 LMAN1P49257 510 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 CTSCP53634 463 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 RPL26P61254 145 aaKnown RBP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 ITKQ08881 620 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 DMPKQ09013 629 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 GALNT2Q10471 571 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 NFE2L1Q14494 772 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 ZNF169Q14929 603 aaPredicted RBP4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 PDK2Q15119 407 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 RPE65Q16518 533 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 ANKRD20A8PQ5CZ79 823 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 NCBP2-AS2Q69YL0 99 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 MYO7BQ6PIF6 2116 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 SARM1Q6SZW1 724 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 POLNQ7Z5Q5 900 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 PPP1R32Q7Z5V6 425 aa4.32□□□□□ -1.72
RNU4-25P-201ENST00000410569 GGNQ86UU5 652 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms