RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 OR2A25A4D2G3 310 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 FITM1A5D6W6 292 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 E7ENX8 843 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 VPS26AO75436 327 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 SEC31AO94979 1220 aaKnown RBP16.95■□□□□ 0.3
LSM5-204ENST00000409909 MED26O95402 600 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 CMPK1P30085 196 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 SKIV2L2P42285 1042 aaKnown RBP16.95■□□□□ 0.3
LSM5-204ENST00000409909 PAFAH1B1P43034 410 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 CCL11P51671 97 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 ARSFP54793 590 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 CDKN2DP55273 166 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 TAP2Q03519 686 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 ATP1A4Q13733 1029 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 GRM7Q14831 915 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 TCTE1Q5JU00 501 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 WASHC2DQ5SRD0 308 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 RBM20Q5T481 1227 aaKnown RBP16.95■□□□□ 0.3
LSM5-204ENST00000409909 TEDDM1Q5T9Z0 273 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 TRMT10BQ6PF06 316 aaKnown RBP16.95■□□□□ 0.3
LSM5-204ENST00000409909 ASB18Q6ZVZ8 466 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 LRRC56Q8IYG6 542 aaPredicted RBP16.95■□□□□ 0.3
LSM5-204ENST00000409909 DTWD1Q8N5C7 304 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 EEF1AKMT1Q8WVE0 214 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 DLG3Q92796 817 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 CERS2Q96G23 380 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 CFAP36Q96G28 342 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 KRT12Q99456 494 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 TRIM31Q9BZY9 425 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 EPN3Q9H201 632 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 SYNPO2LQ9H987 977 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 ACSS2Q9NR19 701 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 CUTCQ9NTM9 273 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 ZC3H7BQ9UGR2 993 aaKnown RBP16.95■□□□□ 0.3
LSM5-204ENST00000409909 GPN3Q9UHW5 284 aaPredicted RBP16.95■□□□□ 0.3
LSM5-204ENST00000409909 ANAPC2Q9UJX6 822 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 CHMP2BQ9UQN3 213 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 PADI2Q9Y2J8 665 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 PTRH2Q9Y3E5 179 aaKnown RBP16.95■□□□□ 0.3
LSM5-204ENST00000409909 RELNP78509 3460 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 COL12A1Q99715 3063 aa16.95■□□□□ 0.3
LSM5-204ENST00000409909 A0A1B0GX78 115 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 DSCR3O14972 297 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 ZBTB14O43829 449 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 SRPX2O60687 465 aaPredicted RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 WISP1O95388 367 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 SYF2O95926 243 aaKnown RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 ONECUT2O95948 504 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 OTX2P32243 289 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 RPA3P35244 121 aaPredicted RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 HSD17B2P37059 387 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 CASRP41180 1078 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 TLE1Q04724 770 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 TSTA3Q13630 321 aaPredicted RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 SSPNQ14714 243 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 HIF1AQ16665 826 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 STEAP4Q687X5 459 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 KIAA0408Q6ZU52 694 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 UBE2R2Q712K3 238 aaPredicted RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 RNF44Q7L0R7 432 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 C17orf53Q8N3J3 647 aaPredicted RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 OR2Y1Q8NGV0 311 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 SNF8Q96H20 258 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 PLCD4Q9BRC7 762 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 MLXIPLQ9NP71 852 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 MRPS30Q9NP92 439 aaKnown RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 RNF14Q9UBS8 474 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 NDOR1Q9UHB4 597 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 TAC3Q9UHF0 121 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 TRMT6Q9UJA5 497 aaKnown RBP16.94■□□□□ 0.3
LSM5-204ENST00000409909 ADAMTS6Q9UKP5 1117 aa16.94■□□□□ 0.3
LSM5-204ENST00000409909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
LSM5-204ENST00000409909 SMAPO00193 183 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 EIF3FO00303 357 aaPredicted RBP16.93■□□□□ 0.3
LSM5-204ENST00000409909 CEACAM4O75871 244 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 UMODP07911 640 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 FOLR3P41439 243 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 RPL21P46778 160 aaKnown RBP16.93■□□□□ 0.3
LSM5-204ENST00000409909 PGGT1BP53609 377 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 PRDX1Q06830 199 aaKnown RBP16.93■□□□□ 0.3
LSM5-204ENST00000409909 KLRB1Q12918 225 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 YOD1Q5VVQ6 348 aaPredicted RBP16.93■□□□□ 0.3
LSM5-204ENST00000409909 ICE2Q659A1 982 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 PAQR3Q6TCH7 311 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 COX15Q7KZN9 410 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 OVCH1Q7RTY7 1134 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 GALNT7Q86SF2 657 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 MRGPREQ86SM8 312 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 PAQR7Q86WK9 346 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 RAB43Q86YS6 212 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 ANKMY2Q8IV38 441 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 LRRC39Q96DD0 335 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 ZFYVE21Q9BQ24 234 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 SLC25A23Q9BV35 468 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 PPANQ9NQ55 473 aaKnown RBP16.93■□□□□ 0.3
LSM5-204ENST00000409909 TAS2R13Q9NYV9 303 aa16.93■□□□□ 0.3
LSM5-204ENST00000409909 STOX2Q9P2F5 926 aaPredicted RBP16.93■□□□□ 0.3
LSM5-204ENST00000409909 MDC1Q14676 2089 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms