RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
LSM5-202ENST00000409292 OR11G2Q8NGC1 345 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 MAGEC3Q8TD91 643 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 NAT14Q8WUY8 206 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 HAS2Q92819 552 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 FOPNLQ96NB1 174 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 LRRC40Q9H9A6 602 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 C14orf105Q9NVL8 296 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 SPHK1Q9NYA1 384 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 PTGFRNQ9P2B2 879 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 ANAPC5Q9UJX4 755 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 C3orf18Q9UK00 162 aa7.41□□□□□ -1.22
LSM5-202ENST00000409292 MYO7BQ6PIF6 2116 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 hCG_1818297A0A087WSY0 165 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 NBPF19A0A087WUL8 3843 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 TRBV5-4A0A0C4DH59 114 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 HYKKA2RU49 373 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 TARM1B6A8C7 271 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 TXNDC9O14530 226 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 GNB5O14775 395 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 KPNA5O15131 536 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 SGTAO43765 313 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 PHF2O75151 1096 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 TJP3O95049 919 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 HEXBP07686 556 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 SNRPB2P08579 225 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 RBP3P10745 1247 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 MSNP26038 577 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 PSMB4P28070 264 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 PBX1P40424 430 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 CA7P43166 264 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 GABRA4P48169 554 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 TNFSF10P50591 281 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 EMP2P54851 167 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 VSX2P58304 361 aaPredicted RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 EIF3EP60228 445 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 HSPA14Q0VDF9 509 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 IQCB1Q15051 598 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 ZIC1Q15915 447 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 TAZQ16635 292 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 P3H1Q32P28 736 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 AARS2Q5JTZ9 985 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 WASHC2DQ5SRD0 308 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 FAM182AQ5T1J6 154 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 FAAH2Q6GMR7 532 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 CAVIN1Q6NZI2 390 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 FIGLAQ6QHK4 219 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 UNC5DQ6UXZ4 953 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 LINC00523Q86TU6 105 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 DEPDC4Q8N2C3 294 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 HORMAD2Q8N7B1 307 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 FAM98AQ8NCA5 519 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 CATSPER1Q8NEC5 780 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 CFAP61Q8NHU2 1237 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 STT3BQ8TCJ2 826 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 SKA2Q8WVK7 121 aaPredicted RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 ITLN2Q8WWU7 325 aaPredicted RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 METTL21AQ8WXB1 218 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 RAD51AP1Q96B01 352 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 CDKN2AIPNLQ96HQ2 116 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 DNAJC1Q96KC8 554 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 CALR3Q96L12 384 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 SPATA13Q96N96 652 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 SPOCK3Q9BQ16 436 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 TRIM56Q9BRZ2 755 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 KRTAP4-6Q9BYQ5 205 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 ARNT2Q9HBZ2 717 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 NLE1Q9NVX2 485 aaPredicted RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 NOP53Q9NZM5 478 aaKnown RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 IFNKQ9P0W0 207 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 C19orf25Q9UFG5 118 aaPredicted RBP7.4□□□□□ -1.22
LSM5-202ENST00000409292 SH3BGRL2Q9UJC5 107 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 NENFQ9UMX5 172 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 CSAG2Q9Y5P2 127 aa7.4□□□□□ -1.22
LSM5-202ENST00000409292 POLQO75417 2590 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 F8P00451 2351 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 OR5H15A6NDH6 313 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 H3BMH7 237 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 MASP2O00187 686 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 RASGRF2O14827 1237 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 PFDN6O15212 129 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 TTI1O43156 1089 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 PRAMEF2O60811 474 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CNOT3O75175 753 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 ALOX12BO75342 701 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 KLHL18O94889 574 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 IPO7O95373 1038 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 EIF2S1P05198 315 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 ZGLP1P0C6A0 271 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CD33P20138 364 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 ACADLP28330 430 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CMPK1P30085 196 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 PKLRP30613 574 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 ADRA1AP35348 466 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CCNFP41002 786 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 OR1D4P47884 311 aa7.39□□□□□ -1.23
LSM5-202ENST00000409292 CSE1LP55060 971 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 NAP1L1P55209 391 aaKnown RBP7.39□□□□□ -1.23
LSM5-202ENST00000409292 PRAMEP78395 509 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms