RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ZNF700Q9H0M5 742 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 TEKT2Q9UIF3 430 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 SLC39A10Q9ULF5 831 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 NPIPA1Q9UND3 350 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 PCDHGB6Q9Y5F9 930 aa15.85■□□□□ 0.13
CHMP3-203ENST00000409225 NIPBLQ6KC79 2804 aaeCLIP15.85■□□□□ 0.13
CHMP3-203ENST00000409225 SPG11Q96JI7 2443 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 A8MUI8 341 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 TARM1B6A8C7 271 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 TTI1O43156 1089 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 PSTPIP1O43586 416 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 MLYCDO95822 493 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 RPN2P04844 631 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 ERVK-10P10266 1014 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 ABOP16442 354 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 AP2B1P63010 937 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 HSPA14Q0VDF9 509 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 KRTCAP3Q53RY4 240 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 PACS1Q6VY07 963 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 CLEC17AQ6ZS10 378 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 SLC22A15Q8IZD6 547 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 AGAP11Q8TF27 550 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 CA5BP1Q8WTZ4 195 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 SDCCAG3Q96C92 435 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 TREX2Q9BQ50 279 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-203ENST00000409225 TMEM121Q9BTD3 319 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 TMUB1Q9BVT8 246 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 HEMGNQ9BXL5 484 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 HES7Q9BYE0 225 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 ARNT2Q9HBZ2 717 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 KLHL1Q9NR64 748 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 C14orf105Q9NVL8 296 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 FEZ2Q9UHY8 353 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-203ENST00000409225 ABCA2Q9BZC7 2435 aa15.84■□□□□ 0.13
CHMP3-203ENST00000409225 ANKHD1Q8IWZ3 2542 aaKnown RBP15.83■□□□□ 0.12
CHMP3-203ENST00000409225 RASGRF2O14827 1237 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 AKR1B10O60218 316 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 OR1I1O60431 355 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 ICAM2P13598 275 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 MSNP26038 577 aaKnown RBP15.83■□□□□ 0.12
CHMP3-203ENST00000409225 ST13P50502 369 aaKnown RBP15.83■□□□□ 0.12
CHMP3-203ENST00000409225 UBASH3AP57075 661 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 DSG2Q14126 1118 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 POU6F1Q14863 301 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 FCRLBQ6BAA4 426 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 BEST3Q8N1M1 668 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 ALS2CR12Q96Q35 445 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 FERMT1Q9BQL6 677 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 CDC14AQ9UNH5 594 aa15.83■□□□□ 0.12
CHMP3-203ENST00000409225 ZNF469Q96JG9 3925 aaPredicted RBP15.83■□□□□ 0.12
CHMP3-203ENST00000409225 LOC102723996A0A087X1L8 192 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 A0A1B0GTL3 188 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 MACROD2A1Z1Q3 448 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 RCCD1A6NED2 376 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 PRPF4O43172 522 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHMP3-203ENST00000409225 ZRANB2O95218 330 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHMP3-203ENST00000409225 FKBP9O95302 570 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 CCR7P32248 378 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 HSF1Q00613 529 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 IQCB1Q15051 598 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 CCDC181Q5TID7 509 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 BBS12Q6ZW61 710 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 RNF44Q7L0R7 432 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 PHF10Q8WUB8 498 aaKnown RBP15.82■□□□□ 0.12
CHMP3-203ENST00000409225 STYXQ8WUJ0 223 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 LRRC45Q96CN5 670 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 MMABQ96EY8 250 aaPredicted RBP15.82■□□□□ 0.12
CHMP3-203ENST00000409225 IMMP1LQ96LU5 166 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 SIGLEC12Q96PQ1 595 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 TUBB6Q9BUF5 446 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 GOLPH3Q9H4A6 298 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 SPTLC3Q9NUV7 552 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 PIH1D1Q9NWS0 290 aaKnown RBP15.82■□□□□ 0.12
CHMP3-203ENST00000409225 ANKRD10Q9NXR5 420 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 PPT2Q9UMR5 302 aa15.82■□□□□ 0.12
CHMP3-203ENST00000409225 APOC4-APOC2K7ER74 178 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 STK10O94804 968 aaKnown RBP15.81■□□□□ 0.12
CHMP3-203ENST00000409225 APOC2P02655 101 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 FOXN2P32314 431 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 MARCKSL1P49006 195 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 TUBA3CQ13748 450 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 PRTGQ2VWP7 1150 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 TUBA3EQ6PEY2 450 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 TMEM205Q6UW68 189 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 UNC5DQ6UXZ4 953 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 TMEM200AQ86VY9 491 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 DOLPP1Q86YN1 238 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 CDKL3Q8IVW4 592 aaPredicted RBP15.81■□□□□ 0.12
CHMP3-203ENST00000409225 KATNAL2Q8IYT4 538 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 RCOR2Q8IZ40 523 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 AMER3Q8N944 861 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 DNAAF3Q8N9W5 541 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 OR2L3Q8NG85 312 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 LKAAEAR1Q8TD35 194 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 SPATA13Q96N96 652 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 DMRTA2Q96SC8 542 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 FAM118BQ9BPY3 351 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 MKKSQ9NPJ1 570 aaPredicted RBP15.81■□□□□ 0.12
CHMP3-203ENST00000409225 MKL2Q9ULH7 1088 aa15.81■□□□□ 0.12
CHMP3-203ENST00000409225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.81■□□□□ 0.125e-7■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms