RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 DHRS4Q9BTZ2 278 aa8.83□□□□□ -1
LIG4-202ENST00000405925 CNPPD1Q9BV87 410 aa8.83□□□□□ -1
LIG4-202ENST00000405925 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.83□□□□□ -1
LIG4-202ENST00000405925 IGSF5Q9NSI5 407 aa8.83□□□□□ -1
LIG4-202ENST00000405925 SUSD2Q9UGT4 822 aa8.83□□□□□ -1
LIG4-202ENST00000405925 ADGRE2Q9UHX3 823 aa8.83□□□□□ -1
LIG4-202ENST00000405925 PTGDR2Q9Y5Y4 395 aa8.83□□□□□ -1
LIG4-202ENST00000405925 PARP14Q460N5 1801 aa8.83□□□□□ -1
LIG4-202ENST00000405925 ATG2BQ96BY7 2078 aa8.83□□□□□ -1
LIG4-202ENST00000405925 APBB3O95704 486 aa8.83□□□□□ -1
LIG4-202ENST00000405925 EGFP01133 1207 aa8.83□□□□□ -1
LIG4-202ENST00000405925 MT-ND1P03886 318 aa8.83□□□□□ -1
LIG4-202ENST00000405925 GCAP28676 217 aa8.83□□□□□ -1
LIG4-202ENST00000405925 MLLT3P42568 568 aaPredicted RBP8.83□□□□□ -1
LIG4-202ENST00000405925 TNFRSF4P43489 277 aa8.83□□□□□ -1
LIG4-202ENST00000405925 SLC13A2Q13183 592 aa8.83□□□□□ -1
LIG4-202ENST00000405925 IRF4Q15306 451 aa8.83□□□□□ -1
LIG4-202ENST00000405925 MLF2Q15773 248 aaPredicted RBP8.83□□□□□ -1
LIG4-202ENST00000405925 ADIPOR2Q86V24 386 aa8.83□□□□□ -1
LIG4-202ENST00000405925 CNTN4Q8IWV2 1026 aa8.83□□□□□ -1
LIG4-202ENST00000405925 ADHFE1Q8IWW8 467 aa8.83□□□□□ -1
LIG4-202ENST00000405925 CAMKK1Q8N5S9 505 aa8.83□□□□□ -1
LIG4-202ENST00000405925 CAMKVQ8NCB2 501 aa8.83□□□□□ -1
LIG4-202ENST00000405925 HSPA12BQ96MM6 686 aa8.83□□□□□ -1
LIG4-202ENST00000405925 IL21RQ9HBE5 538 aa8.83□□□□□ -1
LIG4-202ENST00000405925 ZCCHC3Q9NUD5 404 aaKnown RBP8.83□□□□□ -1
LIG4-202ENST00000405925 EXD2Q9NVH0 621 aa8.83□□□□□ -1
LIG4-202ENST00000405925 MAGEL2Q9UJ55 1249 aa8.83□□□□□ -1
LIG4-202ENST00000405925 A8MUI8 341 aa8.82□□□□□ -1
LIG4-202ENST00000405925 MAGEB17A8MXT2 336 aa8.82□□□□□ -1
LIG4-202ENST00000405925 FAM47E-STBD1D6RA91 191 aa8.82□□□□□ -1
LIG4-202ENST00000405925 HTRA2O43464 458 aaPredicted RBP8.82□□□□□ -1
LIG4-202ENST00000405925 SERPINB7O75635 380 aa8.82□□□□□ -1
LIG4-202ENST00000405925 SMNDC1O75940 238 aaKnown RBP eCLIP8.82□□□□□ -1
LIG4-202ENST00000405925 ZCCHC18P0CG32 403 aa8.82□□□□□ -1
LIG4-202ENST00000405925 LHCGRP22888 699 aa8.82□□□□□ -1
LIG4-202ENST00000405925 CCR7P32248 378 aa8.82□□□□□ -1
LIG4-202ENST00000405925 RABIFP47224 123 aa8.82□□□□□ -1
LIG4-202ENST00000405925 CENPAP49450 140 aa8.82□□□□□ -1
LIG4-202ENST00000405925 CASP9P55211 416 aa8.82□□□□□ -1
LIG4-202ENST00000405925 COPZ1P61923 177 aa8.82□□□□□ -1
LIG4-202ENST00000405925 KCNC3Q14003 757 aa8.82□□□□□ -1
LIG4-202ENST00000405925 DPY19L1Q2PZI1 675 aa8.82□□□□□ -1
LIG4-202ENST00000405925 PHF19Q5T6S3 580 aa8.82□□□□□ -1
LIG4-202ENST00000405925 OR4F3Q6IEY1 312 aa8.82□□□□□ -1
LIG4-202ENST00000405925 PNCKQ6P2M8 343 aa8.82□□□□□ -1
LIG4-202ENST00000405925 ZNF761Q86XN6 746 aaPredicted RBP8.82□□□□□ -1
LIG4-202ENST00000405925 CDK20Q8IZL9 346 aa8.82□□□□□ -1
LIG4-202ENST00000405925 ZNF707Q96C28 371 aaPredicted RBP8.82□□□□□ -1
LIG4-202ENST00000405925 ZBED6CLQ96FA7 236 aaPredicted RBP8.82□□□□□ -1
LIG4-202ENST00000405925 C9orf16Q9BUW7 83 aa8.82□□□□□ -1
LIG4-202ENST00000405925 SPATA5L1Q9BVQ7 753 aa8.82□□□□□ -1
LIG4-202ENST00000405925 ALG2Q9H553 416 aa8.82□□□□□ -1
LIG4-202ENST00000405925 PDFQ9HBH1 243 aa8.82□□□□□ -1
LIG4-202ENST00000405925 ADAP2Q9NPF8 381 aa8.82□□□□□ -1
LIG4-202ENST00000405925 ELOVL7A1L3X0 281 aa8.82□□□□□ -1
LIG4-202ENST00000405925 OR6C74A6NCV1 312 aa8.82□□□□□ -1
LIG4-202ENST00000405925 OR5K4A6NMS3 321 aa8.82□□□□□ -1
LIG4-202ENST00000405925 SDHDO14521 159 aa8.82□□□□□ -1
LIG4-202ENST00000405925 PDPK1O15530 556 aa8.82□□□□□ -1
LIG4-202ENST00000405925 SUV39H1O43463 412 aa8.82□□□□□ -1
LIG4-202ENST00000405925 VARSP26640 1264 aaKnown RBP8.82□□□□□ -1
LIG4-202ENST00000405925 AK4P27144 223 aaPredicted RBP8.82□□□□□ -1
LIG4-202ENST00000405925 PRDX6P30041 224 aa8.82□□□□□ -1
LIG4-202ENST00000405925 MMP12P39900 470 aa8.82□□□□□ -1
LIG4-202ENST00000405925 EIF2DP41214 584 aaKnown RBP8.82□□□□□ -1
LIG4-202ENST00000405925 ETV4P43268 484 aa8.82□□□□□ -1
LIG4-202ENST00000405925 UFM1P61960 85 aa8.82□□□□□ -1
LIG4-202ENST00000405925 HNRNPKP61978 463 aaKnown RBP eCLIP8.82□□□□□ -1
LIG4-202ENST00000405925 DOC2AQ14183 400 aa8.82□□□□□ -1
LIG4-202ENST00000405925 TYSND1Q2T9J0 566 aa8.82□□□□□ -1
LIG4-202ENST00000405925 LACTB2Q53H82 288 aaPredicted RBP8.82□□□□□ -1
LIG4-202ENST00000405925 SPIN4Q56A73 249 aa8.82□□□□□ -1
LIG4-202ENST00000405925 C6orf136Q5SQH8 315 aa8.82□□□□□ -1
LIG4-202ENST00000405925 CCDC81Q6ZN84 652 aa8.82□□□□□ -1
LIG4-202ENST00000405925 SPPL2CQ8IUH8 684 aa8.82□□□□□ -1
LIG4-202ENST00000405925 OR5AR1Q8NGP9 310 aa8.82□□□□□ -1
LIG4-202ENST00000405925 DPH7Q9BTV6 452 aa8.82□□□□□ -1
LIG4-202ENST00000405925 CADM1Q9BY67 442 aaKnown RBP8.82□□□□□ -1
LIG4-202ENST00000405925 MVB12BQ9H7P6 319 aa8.82□□□□□ -1
LIG4-202ENST00000405925 GPN3Q9UHW5 284 aaPredicted RBP8.82□□□□□ -1
LIG4-202ENST00000405925 SH3GLB1Q9Y371 365 aa8.82□□□□□ -1
LIG4-202ENST00000405925 LOC285556D6RIA3 1793 aa8.82□□□□□ -1
LIG4-202ENST00000405925 PLXNA1Q9UIW2 1896 aa8.82□□□□□ -1
LIG4-202ENST00000405925 A0A1W2PRB8 838 aa8.82□□□□□ -1
LIG4-202ENST00000405925 CCDC189A1A4V9 331 aa8.82□□□□□ -1
LIG4-202ENST00000405925 G3V2L1 256 aa8.82□□□□□ -1
LIG4-202ENST00000405925 VNN2O95498 520 aa8.82□□□□□ -1
LIG4-202ENST00000405925 MMP2P08253 660 aa8.82□□□□□ -1
LIG4-202ENST00000405925 C1GALT1C1LP0DN25 315 aa8.82□□□□□ -1
LIG4-202ENST00000405925 CR2P20023 1033 aa8.82□□□□□ -1
LIG4-202ENST00000405925 BTN3A2P78410 334 aa8.82□□□□□ -1
LIG4-202ENST00000405925 IL5RAQ01344 420 aa8.82□□□□□ -1
LIG4-202ENST00000405925 PTSQ03393 145 aa8.82□□□□□ -1
LIG4-202ENST00000405925 SPANXN4Q5MJ08 99 aa8.82□□□□□ -1
LIG4-202ENST00000405925 C12orf40Q86WS4 652 aa8.82□□□□□ -1
LIG4-202ENST00000405925 C11orf65Q8NCR3 313 aa8.82□□□□□ -1
LIG4-202ENST00000405925 TRPV3Q8NET8 790 aa8.82□□□□□ -1
LIG4-202ENST00000405925 MAGEE2Q8TD90 523 aaPredicted RBP8.82□□□□□ -1
LIG4-202ENST00000405925 METTL21AQ8WXB1 218 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms