RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TSPAN4O14817 238 aa13.04□□□□□ -0.32
SNED1-205ENST00000405547 LINGO3P0C6S8 592 aa13.04□□□□□ -0.32
SNED1-205ENST00000405547 DCDC1P59894 354 aa13.04□□□□□ -0.32
SNED1-205ENST00000405547 MADCAM1Q13477 382 aa13.04□□□□□ -0.32
SNED1-205ENST00000405547 EFCAB11Q9BUY7 163 aa13.04□□□□□ -0.32
SNED1-205ENST00000405547 RRAGCQ9HB90 399 aa13.04□□□□□ -0.32
SNED1-205ENST00000405547 ANKRD66B4E2M5 251 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 EFNA1P20827 205 aaPredicted RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 ASRGL1Q7L266 308 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 NXPE1Q8N323 547 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 KAT2AQ92830 837 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 ERLEC1Q96DZ1 483 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 CNDP2Q96KP4 475 aaKnown RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 ZNF696Q9H7X3 374 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 POPDC3Q9HBV1 291 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 RNF6Q9Y252 685 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 DDX60Q8IY21 1712 aaKnown RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 A0A1B0GUL6 1792 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 GBX2P52951 348 aaPredicted RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 PPP3R1P63098 170 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 CD83Q01151 205 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 PLEKHO2Q8TD55 490 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 FCF1Q9Y324 198 aaKnown RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 TTC3P53804 2025 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 AGR2O95994 175 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 CCR8P51685 355 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 CYS1Q717R9 158 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 TMEM199Q8N511 208 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 SMG7Q92540 1137 aaKnown RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 IL4I1Q96RQ9 567 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 MAPKAP1Q9BPZ7 522 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 METTL21EPA6NDL7 271 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 ALPPP05187 535 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 SERINC3Q13530 473 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 GANABQ14697 944 aaKnown RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 PEX13Q92968 403 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 FBXL20Q96IG2 436 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 CCM2LQ9NUG4 571 aaPredicted RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 USP2O75604 605 aaPredicted RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 ENTPD1P49961 510 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 C1QTNF8P60827 252 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 SLC30A6Q6NXT4 461 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 SLC2A7Q6PXP3 512 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 CCDC107Q8WV48 283 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 SLC7A6OSQ96CW6 309 aaPredicted RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 SH3PXD2BA1X283 911 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 ALDOAP04075 364 aaKnown RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 CTNNB1P35222 781 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 DSTNP60981 165 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 ZNF678Q5SXM1 525 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 INO80EQ8NBZ0 244 aaPredicted RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 FRMD6Q96NE9 622 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 PPIEQ9UNP9 301 aaKnown RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 MAP1BP46821 2468 aaKnown RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 TLR4O00206 839 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 ENPP3O14638 875 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 ECHS1P30084 290 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 TIGD5Q53EQ6 642 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 DNAJA4Q8WW22 397 aaPredicted RBP13.03□□□□□ -0.32
SNED1-205ENST00000405547 HEPHQ9BQS7 1158 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 BCAS3Q9H6U6 928 aa13.03□□□□□ -0.32
SNED1-205ENST00000405547 TACSTD2P09758 323 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 GIMD1P0DJR0 217 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 SP3Q02447 781 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 RAB39AQ14964 217 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 ZCCHC12Q6PEW1 402 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 MBOAT1Q6ZNC8 495 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 CHST9Q7L1S5 443 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 GALNT13Q8IUC8 556 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 OR8J3Q8NGG0 315 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 NCSTNQ92542 709 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 CD84Q9UIB8 345 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 SPEF1Q9Y4P9 236 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 G6PDP11413 515 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 PTGS2P35354 604 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 ADGRF1Q5T601 910 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 KIAA1324Q6UXG2 1013 aaKnown RBP13.02□□□□□ -0.32
SNED1-205ENST00000405547 PLD6Q8N2A8 252 aaKnown RBP13.02□□□□□ -0.32
SNED1-205ENST00000405547 PQLC3Q8N755 202 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 COX18Q8N8Q8 333 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 RBM18Q96H35 190 aaKnown RBP13.02□□□□□ -0.32
SNED1-205ENST00000405547 CST11Q9H112 138 aa13.02□□□□□ -0.32
SNED1-205ENST00000405547 A0A1W2PPW3 197 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 XPNPEP2O43895 674 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 GRK6P43250 576 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 MLLT6P55198 1093 aaPredicted RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 ADGRD2Q7Z7M1 963 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 NPY6RQ99463 290 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 FKBP14Q9NWM8 211 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 PSAT1Q9Y617 370 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3DA0A087WVF3 549 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3IA0A087WXS9 549 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3EA0A087X179 549 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3KA0A087X1G2 549 aa13.02□□□□□ -0.33
SNED1-205ENST00000405547 TBC1D3FA6NER0 549 aaPredicted RBP13.02□□□□□ -0.33
SNED1-205ENST00000405547 SLC38A8A6NNN8 435 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms