RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	HDAC10	Q969S8	669 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PEBP4	Q96S96	227 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	AGAP2	Q99490	1192 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SPATA16	Q9BXB7	569 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TDRD1	Q9BXT4	1180 aa	Known RBP	6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ADGRE3	Q9BY15	652 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CLSTN2	Q9H4D0	955 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	FANCE	Q9HB96	536 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MRPL47	Q9HD33	250 aa	Known RBP	6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	WASH6P	Q9NQA3	447 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZIM2	Q9NZV7	527 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	AMACR	Q9UHK6	382 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RELN	P78509	3460 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	FLNC	Q14315	2725 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	NBAS	A2RRP1	2371 aa		6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	USP9X	Q93008	2570 aa	Predicted RBP	6.58	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TEX15	Q9BXT5	2789 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	COL12A1	Q99715	3063 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TMEM191C	A6NGB0	347 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TMCO5B	A8MYB1	307 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TCP11X1	B4DZS4	312 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KMO	O15229	486 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	VEGFD	O43915	354 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KLHL41	O60662	606 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SCRG1	O75711	98 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SLC25A14	O95258	325 aa	Predicted RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PEX11B	O96011	259 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PDHA1	P08559	390 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MYBL1	P10243	752 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZNF8	P17098	575 aa	Predicted RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	COMT	P21964	271 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ELAVL4	P26378	380 aa	Known RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TNFRSF8	P28908	595 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SPINT3	P49223	89 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	GSDMD	P57764	484 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TUBB4B	P68371	445 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	UBXN1	Q04323	297 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CHAF1B	Q13112	559 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TUBB2A	Q13885	445 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PTPRR	Q15256	657 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KRT31	Q15323	416 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KIF26B	Q2KJY2	2108 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SMTNL2	Q2TAL5	461 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	EIF2S3L	Q2VIR3	472 aa	Known RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZRANB3	Q5FWF4	1079 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	DNTTIP2	Q5QJE6	756 aa	Known RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TMTC4	Q5T4D3	741 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HENMT1	Q5T8I9	393 aa	Known RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PAPD7	Q5XG87	772 aa	Known RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PDPK2P	Q6A1A2	396 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PWWP2B	Q6NUJ5	590 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ARMC6	Q6NXE6	501 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	JMJD6	Q6NYC1	403 aa	Predicted RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KMT5C	Q86Y97	462 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TICAM1	Q8IUC6	712 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TMEM126B	Q8IUX1	230 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PQLC1	Q8N2U9	271 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	D2HGDH	Q8N465	521 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	OR8K5	Q8NH50	307 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TM9SF4	Q92544	642 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	HSPH1	Q92598	858 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RSC1A1	Q92681	617 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MR1	Q95460	341 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PNPLA2	Q96AD5	504 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZNF653	Q96CK0	615 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RNF31	Q96EP0	1072 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SLC41A2	Q96JW4	573 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	NSMCE3	Q96MG7	304 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TTC25	Q96NG3	672 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CSPG4P5	Q96PW8	444 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	LYSMD1	Q96S90	227 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CD180	Q99467	661 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TIMM29	Q9BSF4	260 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ZSCAN5A	Q9BUG6	496 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MLPH	Q9BV36	600 aa	Predicted RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	TUBB2B	Q9BVA1	445 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	NUP62CL	Q9H1M0	184 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	OR2AG1	Q9H205	316 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MANSC1	Q9H8J5	431 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	PCDH9	Q9HC56	1237 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	RBM22	Q9NW64	420 aa	Known RBP eCLIP	6.57	□□□□□ -1.36	6e-14	■■■■■ 37.3
CEACAM1-208	ENST00000403461	GPR83	Q9NYM4	423 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	OGFR	Q9NZT2	677 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	ATXN10	Q9UBB4	475 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	EPHA6	Q9UF33	1036 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SNX7	Q9UNH6	387 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CHKB	Q9Y259	395 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	FARSA	Q9Y285	508 aa	Known RBP	6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	DNAJC16	Q9Y2G8	782 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SIK3	Q9Y2K2	1263 aa		6.57	□□□□□ -1.36
CEACAM1-208	ENST00000403461	DOCK9	Q9BZ29	2069 aa		6.56	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CREBBP	Q92793	2442 aa		6.56	□□□□□ -1.36
CEACAM1-208	ENST00000403461	SPTBN1	Q01082	2364 aa	Known RBP	6.56	□□□□□ -1.36
CEACAM1-208	ENST00000403461		A0A0U1RQS6	177 aa		6.56	□□□□□ -1.36
CEACAM1-208	ENST00000403461	CCDC154	A6NI56	674 aa		6.56	□□□□□ -1.36
CEACAM1-208	ENST00000403461	LGALS16	A8MUM7	142 aa		6.56	□□□□□ -1.36
CEACAM1-208	ENST00000403461	MATN3	O15232	486 aa		6.56	□□□□□ -1.36
CEACAM1-208	ENST00000403461	KIF1C	O43896	1103 aa	Known RBP	6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms