RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 CXCR2P25025 360 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 AOAHP28039 575 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 SEMA3AQ14563 771 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.86□□□□□ -0.19
VAMP1-203ENST00000400911 FBXO42Q6P3S6 717 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 MTFR2Q6P444 385 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 CNSTQ6PJW8 725 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 CNGA4Q8IV77 575 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 ZNF295-AS1Q8N0V1 137 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 KRT222Q8N1A0 295 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 OR2L3Q8NG85 312 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 OR52K1Q8NGK4 314 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 OR6P1Q8NGX9 317 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 OR4L1Q8NH43 312 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 DNAJB8Q8NHS0 232 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 C10orf90Q96M02 699 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 CARD6Q9BX69 1037 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 TSSK1BQ9BXA7 367 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 TRPC4Q9UBN4 977 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 TTC7AQ9ULT0 858 aaPredicted RBP13.86□□□□□ -0.19
VAMP1-203ENST00000400911 KLK4Q9Y5K2 254 aa13.86□□□□□ -0.19
VAMP1-203ENST00000400911 DIDO1Q9BTC0 2240 aaKnown RBP13.85□□□□□ -0.19
VAMP1-203ENST00000400911 A0A1W2PQ72 361 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 PSMD3O43242 534 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 ERVK-10P10266 1014 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 ITGAMP11215 1152 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 CETN2P41208 172 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 GDF10P55107 478 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 RWDD2BP57060 319 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 YBX1P67809 324 aaKnown RBP13.85□□□□□ -0.19
VAMP1-203ENST00000400911 MUM1Q2TAK8 710 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 CCSMST1Q4G0I0 132 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 HIBCHQ6NVY1 386 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-203ENST00000400911 TTC23LQ6PF05 361 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 XKRXQ6PP77 449 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 AFTPHQ6ULP2 937 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 ZNF534Q76KX8 674 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 RNF44Q7L0R7 432 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 LINC00523Q86TU6 105 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 LDB1Q86U70 411 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-203ENST00000400911 DNAAF3Q8N9W5 541 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 ALG3Q92685 438 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 CABS1Q96KC9 395 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 ZNF778Q96MU6 729 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 RAB11FIP5Q9BXF6 653 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 STMN3Q9NZ72 180 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 NFS1Q9Y697 457 aa13.85□□□□□ -0.19
VAMP1-203ENST00000400911 MDC1Q14676 2089 aaKnown RBP13.84□□□□□ -0.19
VAMP1-203ENST00000400911 SLC19A2O60779 497 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 ZNF189O75820 626 aaPredicted RBP13.84□□□□□ -0.19
VAMP1-203ENST00000400911 C1orf105O95561 183 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 HEXBP07686 556 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 BDKRB1P46663 353 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 CASP6P55212 293 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 ADORA2A-AS1P86434 159 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 PMP22Q01453 160 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 RBPJQ06330 500 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 SPA17Q15506 151 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 PRTGQ2VWP7 1150 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 P3H1Q32P28 736 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 FASTKD1Q53R41 847 aaKnown RBP13.84□□□□□ -0.19
VAMP1-203ENST00000400911 TSTD2Q5T7W7 516 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 ABHD17BQ5VST6 288 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 RIPOR1Q6ZS17 1223 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 OR2A1Q8NGT9 310 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 SUN3Q8TAQ9 357 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 SKA2Q8WVK7 121 aaPredicted RBP13.84□□□□□ -0.19
VAMP1-203ENST00000400911 RAD51AP1Q96B01 352 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 TMEM121Q9BTD3 319 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 RNF32Q9H0A6 362 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 RUVBL2Q9Y230 463 aaKnown RBP13.84□□□□□ -0.19
VAMP1-203ENST00000400911 DUSP10Q9Y6W6 482 aa13.84□□□□□ -0.19
VAMP1-203ENST00000400911 CCDC88CQ9P219 2028 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 HIVEP1P15822 2718 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 A0A1W2PPV9 198 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 OR5H15A6NDH6 313 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 H0YGG7 62 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 C19orf84I3L1E1 186 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 PRAMEF2O60811 474 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 GAS8O95995 478 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 PTMAP06454 111 aaKnown RBP13.83□□□□□ -0.2
VAMP1-203ENST00000400911 MYBL2P10244 700 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 ESRRAP11474 423 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-203ENST00000400911 PPARGP37231 505 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-203ENST00000400911 SLC26A3P40879 764 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 NAP1L1P55209 391 aaKnown RBP13.83□□□□□ -0.2
VAMP1-203ENST00000400911 KRTAP10-9P60411 292 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 ARF3P61204 181 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-203ENST00000400911 CDH17Q12864 832 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 TBX2Q13207 712 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-203ENST00000400911 DSG2Q14126 1118 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 FASTKQ14296 549 aaKnown RBP13.83□□□□□ -0.2
VAMP1-203ENST00000400911 TMED2Q15363 201 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 CDSNQ15517 529 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 C3AR1Q16581 482 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 NEK10Q6ZWH5 1172 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 AMER3Q8N944 861 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 GSDMBQ8TAX9 411 aa13.83□□□□□ -0.2
VAMP1-203ENST00000400911 HMGCLL1Q8TB92 370 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms