RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CCNDBP1O95273 360 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 WISP1O95388 367 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 ALBP02768 609 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 PIM1P11309 404 aaPredicted RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 RPA3P35244 121 aaPredicted RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 FOLR3P41439 243 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 RGS4P49798 205 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 PRDX1Q06830 199 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 CBLBQ13191 982 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 FRG1Q14331 258 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 SSPNQ14714 243 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 FAM214AQ32MH5 1076 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 STEAP4Q687X5 459 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 SUSD1Q6UWL2 747 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 TTLL10Q6ZVT0 673 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 ASB18Q6ZVZ8 466 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 IGDCC3Q8IVU1 814 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 CPNE9Q8IYJ1 553 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 ZFYVE21Q9BQ24 234 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 TRIM51Q9BSJ1 452 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 DPH7Q9BTV6 452 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 ACAT2Q9BWD1 397 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 SLC26A1Q9H2B4 701 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 PLAC1Q9HBJ0 212 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 SLC6A20Q9NP91 592 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 MRPS30Q9NP92 439 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 SLC22A11Q9NSA0 550 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 CUTCQ9NTM9 273 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 TAS2R13Q9NYV9 303 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 ZC3H7BQ9UGR2 993 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 CORO1CQ9ULV4 474 aaPredicted RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 PTRH2Q9Y3E5 179 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 PCDHGB7Q9Y5F8 929 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 TEX264Q9Y6I9 313 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 PCSK5Q92824 1860 aa14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 MDC1Q14676 2089 aaKnown RBP14.24□□□□□ -0.13
SMIM11A-203ENST00000399299 NBASA2RRP1 2371 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 E7ENX8 843 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 K7EM74 188 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 TP73O15350 636 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 CNOT3O75175 753 aaKnown RBP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 IGHEP01854 428 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 AHSGP02765 367 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 NR1D1P20393 614 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ITGAXP20702 1163 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ALAS2P22557 587 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 MCM3P25205 808 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 GABRB3P28472 473 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ELK3P41970 407 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 CSRP3P50461 194 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ITGA8P53708 1063 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ARL4CP56559 192 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 VSX2P58304 361 aaPredicted RBP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ABATP80404 500 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 TIAL1Q01085 375 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 TAP2Q03519 686 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 RELAQ04206 551 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 TLE1Q04724 770 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 SP140Q13342 867 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ATP1A4Q13733 1029 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 WASHC2DQ5SRD0 308 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 TEDDM1Q5T9Z0 273 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ICE2Q659A1 982 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 FRMPD2BQ6IN97 320 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 ZNF425Q6IV72 752 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 UBE2R2Q712K3 238 aaPredicted RBP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 PIWIL4Q7Z3Z4 852 aaKnown RBP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 MRGPREQ86SM8 312 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 LRRC56Q8IYG6 542 aaPredicted RBP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 NACC2Q96BF6 587 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 PTERQ96BW5 349 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 NDNQ99608 321 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 PLCD4Q9BRC7 762 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 WDR83Q9BRX9 315 aaKnown RBP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 SLC25A23Q9BV35 468 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 EPN3Q9H201 632 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 WDR54Q9H977 334 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 UTP6Q9NYH9 597 aaKnown RBP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 TAC3Q9UHF0 121 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 CHMP2BQ9UQN3 213 aa14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 TNRC6AQ8NDV7 1962 aaKnown RBP14.23□□□□□ -0.13
SMIM11A-203ENST00000399299 IGKV1-8A0A0C4DH67 115 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 A0A0J9YVX5 310 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 EFCAB8A8MWE9 144 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 NRP2O60462 931 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 SYF2O95926 243 aaKnown RBP14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 C8GP07360 202 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 IMPA1P29218 277 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 OTX2P32243 289 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 CARSP49589 748 aaKnown RBP14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 CCL11P51671 97 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 PGDP52209 483 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 EMP3P54852 163 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 YBX1P67809 324 aaKnown RBP14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 CHAF1BQ13112 559 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 SLC9A5Q14940 896 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 RBM20Q5T481 1227 aaKnown RBP14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 OVCH1Q7RTY7 1134 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 PAQR7Q86WK9 346 aa14.22□□□□□ -0.13
SMIM11A-203ENST00000399299 TEX19Q8NA77 164 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms