RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 DNASE1L3Q13609 305 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 EFTUD2Q15029 972 aaKnown RBP eCLIP13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TAF1BQ53T94 588 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FAM69BQ5VUD6 431 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ICE2Q659A1 982 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FRMPD2BQ6IN97 320 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 C16orf46Q6P387 395 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PPM1NQ8N819 430 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ANKRD49Q8WVL7 239 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CCDC138Q96M89 665 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 LRFN5Q96NI6 719 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CPNE1Q99829 537 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 EFHD1Q9BUP0 239 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ATG10Q9H0Y0 220 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 MRPS30Q9NP92 439 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TXNDC16Q9P2K2 825 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 DHCR7Q9UBM7 475 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 KLK4Q9Y5K2 254 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SEC16AO15027 2179 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 LOC105369274A0A096LPK9 316 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 LOC102723532A0A0G2JNH3 316 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 A0A0J9YVX5 310 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZNF839A8K0R7 811 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZNF891A8MT65 544 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FKBP9O95302 570 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FURINP09958 794 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ECHS1P30084 290 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TBPL1P62380 186 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 LY6DQ14210 128 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ERV3-1Q14264 604 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZXDCQ2QGD7 858 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZC3H12BQ5HYM0 836 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 THEMIS2Q5TEJ8 643 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 C1orf189Q5VU69 101 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FBXO42Q6P3S6 717 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 OR4N4Q8N0Y3 316 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PDLIM5Q96HC4 596 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RBBP8Q99708 897 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 UNKQ9C0B0 810 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ACTL8Q9H568 366 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SYNPO2LQ9H987 977 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GPAMQ9HCL2 828 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CUEDC1Q9NWM3 386 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 UTP6Q9NYH9 597 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 KCND3Q9UK17 655 aa13.51□□□□□ -0.25
HLA-DQB1-202ENST00000399079 OR2A25A4D2G3 310 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CDC7O00311 574 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ATXN7O15265 892 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SLC16A5O15375 505 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PHGDHO43175 533 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GUCA1CO95843 209 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PRB1P04280 392 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CAPN1P07384 714 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 STX2P32856 288 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GP5P40197 560 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 VSX2P58304 361 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NFKB2Q00653 900 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NAE1Q13564 534 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PCM1Q15154 2024 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TBR1Q16650 682 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 LINC00303Q3SY05 128 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GLE1Q53GS7 698 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZNF385CQ66K41 422 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RHBDD2Q6NTF9 364 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TLDC1Q6P9B6 456 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 AGTRAPQ6RW13 159 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SBSNQ6UWP8 590 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SPATA6LQ8N4H0 392 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CEP112Q8N8E3 955 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ALKBH8Q96BT7 664 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 MRRFQ96E11 262 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 MED8Q96G25 268 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SELENOSQ9BQE4 189 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PLCD4Q9BRC7 762 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CCDC177Q9NQR7 707 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ARL15Q9NXU5 204 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SH2B3Q9UQQ2 575 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PCDHGA6Q9Y5G7 932 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 AP1M2Q9Y6Q5 423 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ANKRD12Q6UB98 2062 aa13.5□□□□□ -0.25
HLA-DQB1-202ENST00000399079 NPEPPSL1A6NEC2 478 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 C21orf140B9A014 251 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CREG1O75629 220 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 EIF2S1P05198 315 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HIST1H2AGP0C0S8 130 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HIST1H2ADP20671 130 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ALAS2P22557 587 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GMPRP36959 345 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SLC12A2P55011 1212 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 POU4F1Q01851 419 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CDC20Q12834 499 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 USP10Q14694 798 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SLC9A5Q14940 896 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PPP1R3AQ16821 1122 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 WASHC2DQ5SRD0 308 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FAM198BQ6UWH4 519 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TTLL10Q6ZVT0 673 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RNF44Q7L0R7 432 aa13.49□□□□□ -0.25
HLA-DQB1-202ENST00000399079 PLD3Q8IV08 490 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms