RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 CD200R1Q8TD46 325 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PIK3R3Q92569 461 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DUSP26Q9BV47 211 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CD244Q9BZW8 370 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TPT1P8Q9HAU6 139 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 UTS2RQ9UKP6 389 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 NDUFB5O43674 189 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CATP04040 527 aaKnown RBP10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DNTTP04053 509 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TIE1P35590 1138 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SRSF11Q05519 484 aaKnown RBP10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ST3GAL4Q11206 333 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PTPRRQ15256 657 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DEF8Q6ZN54 512 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 NLGN2Q8NFZ4 835 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 VANGL1Q8TAA9 524 aaPredicted RBP10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF675Q8TD23 568 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GTF2H4Q92759 462 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PSKH2Q96QS6 385 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 AMBRA1Q9C0C7 1298 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 KCNH6Q9H252 994 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 BRD9Q9H8M2 597 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TIGARQ9NQ88 270 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TRPV5Q9NQA5 729 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MALT1Q9UDY8 824 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CD84Q9UIB8 345 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CFL2Q9Y281 166 aa10.83□□□□□ -0.68
CSGALNACT1-202ENST00000397998 KIAA1217Q5T5P2 1943 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MROH6A6NGR9 719 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CCRL2O00421 344 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PDE9AO76083 593 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CLDN7O95471 211 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PRPS1L1P21108 318 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 WEE1P30291 646 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 OR1D2P34982 312 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SPAM1P38567 509 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 HNF4AP41235 474 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TUFMP49411 452 aaKnown RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SCN1BQ07699 218 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CHRNA6Q15825 494 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF284Q2VY69 593 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PTCHD3Q3KNS1 767 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ADPRMQ3LIE5 342 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 POM121L1PQ3SYA9 428 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DESI1Q6ICB0 168 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TTC9BQ8N6N2 239 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 NACC2Q96BF6 587 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TMCO6Q96DC7 493 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 FUBP3Q96I24 572 aaKnown RBP eCLIP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 BEX2Q9BXY8 128 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SLC32A1Q9H598 525 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DCAF13Q9NV06 445 aaKnown RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MOSPD1Q9UJG1 213 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 A0A096LPI6 279 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 LOC285095A0A1B0GVY8 99 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 AREL1O15033 823 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MUSKO15146 869 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CPNE6O95741 557 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 EBLN1P0CF75 366 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PPIBP23284 216 aaKnown RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 C21orf33P30042 268 aaPredicted RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CD83Q01151 205 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 AQP6Q13520 282 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 KRT33BQ14525 404 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 VMACQ2NL98 169 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF691Q5VV52 312 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TRIM40Q6P9F5 258 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF517Q6ZMY9 492 aaPredicted RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 USP45Q70EL2 814 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF467Q7Z7K2 595 aaPredicted RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TRIM48Q8IWZ4 208 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GALNT12Q8IXK2 581 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DNAJB8Q8NHS0 232 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TMEM203Q969S6 136 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TRNT1Q96Q11 434 aaKnown RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TRIT1Q9H3H1 467 aaKnown RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 STMN3Q9NZ72 180 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TAF1LQ8IZX4 1826 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PIPSLA2A3N6 862 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ARNTLO00327 626 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MTX2O75431 263 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CSF2P04141 144 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 JUNBP17275 347 aaPredicted RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RPL17P18621 184 aaKnown RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GKP32189 559 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PGFP49763 221 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 HKDC1Q2TB90 917 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CTU2Q2VPK5 515 aaKnown RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 IFI44LQ53G44 452 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CEP78Q5JTW2 689 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GDF6Q6KF10 455 aaPredicted RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 B3GNT8Q7Z7M8 397 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PGBD5Q8N414 524 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DPP10Q8N608 796 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GFM1Q96RP9 751 aaKnown RBP10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 BOCQ9BWV1 1114 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 BRINP2Q9C0B6 783 aa10.82□□□□□ -0.68
CSGALNACT1-202ENST00000397998 POLR2J2Q9GZM3 115 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms