RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TRIM46Q7Z4K8 759 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 DDIASQ8IXT1 998 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 PTCD3Q96EY7 689 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 OR6C2Q9NZP2 312 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 SUSD2Q9UGT4 822 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 DYRK1BQ9Y463 629 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 GOLGA4Q13439 2230 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 CAPN14A8MX76 684 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 ULK1O75385 1050 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 UBOX5O94941 541 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 C1orf61Q13536 156 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 ABRAXAS2Q15018 415 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 ZRSR2Q15696 482 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 CPSF6Q16630 551 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 IL27RAQ6UWB1 636 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 Q6ZSR9 355 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 GKN2Q86XP6 184 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 CPSF7Q8N684 471 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 ZBTB44Q8NCP5 570 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 ZNF548Q8NEK5 533 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 OR2T11Q8NH01 316 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 SLC5A11Q8WWX8 675 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 EFCAB11Q9BUY7 163 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 CCDC106Q9BWC9 280 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 AKTIPQ9H8T0 292 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 TMEM74BQ9NUR3 256 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 ZSCAN32Q9NX65 697 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 CPNE7Q9UBL6 633 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 RAPGEFL1Q9UHV5 662 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 SNX6Q9UNH7 406 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 HCN4Q9Y3Q4 1203 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 PCDH15Q96QU1 1955 aa18.81■□□□□ 0.6
PDLIM2-205ENST00000397761 A0A1B0GVT2 93 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 ATP6AP2A0A1C7CYW4 349 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 NPIPB8E9PQR5 432 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 LMO7DNF2Z398 122 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 FFAR3O14843 346 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 GPR42O15529 346 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 ATP6AP2O75787 350 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 C1GALT1C1LP0DN25 315 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 GNSP15586 552 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 AVPR2P30518 371 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 BNC1Q01954 994 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 KRT72Q14CN4 511 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 LACTB2Q53H82 288 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 NXPE4Q6UWF7 544 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 ABHD11Q8NFV4 315 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 OR2A1Q8NGT9 310 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 WDR20Q8TBZ3 569 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 SLC37A2Q8TED4 501 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 XKR8Q9H6D3 395 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 RIC8BQ9NVN3 520 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 TSC22D4Q9Y3Q8 395 aa18.8■□□□□ 0.6
PDLIM2-205ENST00000397761 SLC22A2O15244 555 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 PIAS2O75928 621 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 ADSLP30566 484 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 HOXD12P35452 270 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 BNIP1Q12981 228 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 C10orf62Q5T681 223 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 FRG2Q64ET8 278 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 TMEM198Q66K66 360 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 NXNQ6DKJ4 435 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 CCDC121Q6ZUS5 278 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 AMIGO1Q86WK6 493 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 C17orf82Q86X59 251 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 FAM129CQ86XR2 697 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 MYLK4Q86YV6 388 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 RBM12BQ8IXT5 1001 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 FAM46DQ8NEK8 389 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 ZDHHC1Q8WTX9 485 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 LCN9Q8WX39 176 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 PATE1Q8WXA2 126 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 FRG2BQ96QU4 278 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 PELI2Q9HAT8 420 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 MRGBPQ9NV56 204 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 GEMIN8Q9NWZ8 242 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 TAC3Q9UHF0 121 aa18.79■□□□□ 0.6
PDLIM2-205ENST00000397761 CACNA1HO95180 2353 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 YY2O15391 372 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 AQP9O43315 295 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 VIPP01282 170 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 SP9P0CG40 484 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 LBPP18428 481 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 PRPH2P23942 346 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 VARSP26640 1264 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 RXRGP48443 463 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 IRX1P78414 480 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 LAPTM5Q13571 262 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 TSTA3Q13630 321 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 GPR18Q14330 331 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 KIF19Q2TAC6 998 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 SMU1Q2TAY7 513 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 CATSPEREQ5SY80 951 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 THEMIS2Q5TEJ8 643 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 ICE2Q659A1 982 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 TMPRSS11BQ86T26 416 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 C17orf64Q86WR6 236 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 TREML1Q86YW5 311 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 SYT12Q8IV01 421 aa18.78■□□□□ 0.6
PDLIM2-205ENST00000397761 SFTPA2Q8IWL1 248 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms