RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 SKIV2LQ15477 1246 aaKnown RBP21.23■□□□□ 0.99
NFIX-203ENST00000397661 NXPE1Q8N323 547 aa21.23■□□□□ 0.99
NFIX-203ENST00000397661 ZCCHC7Q8N3Z6 543 aaKnown RBP21.23■□□□□ 0.99
NFIX-203ENST00000397661 GPR156Q8NFN8 814 aa21.23■□□□□ 0.99
NFIX-203ENST00000397661 PDP1Q9P0J1 537 aaPredicted RBP21.23■□□□□ 0.99
NFIX-203ENST00000397661 MYO1DO94832 1006 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 NUDT7P0C024 238 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 RAB15P59190 212 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 NEK5Q6P3R8 708 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 CHST9Q7L1S5 443 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 CDK5RAP1Q96SZ6 601 aaKnown RBP21.22■□□□□ 0.99
NFIX-203ENST00000397661 SIAEQ9HAT2 523 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 HMG20AQ9NP66 347 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 JRKO75564 520 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 HIST1H2AGP0C0S8 130 aaPredicted RBP21.22■□□□□ 0.99
NFIX-203ENST00000397661 SDC1P18827 310 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 HIST1H2ADP20671 130 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 ISL1P61371 349 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 EMX1Q04741 257 aaPredicted RBP21.22■□□□□ 0.99
NFIX-203ENST00000397661 SREBF2Q12772 1141 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 VEPH1Q14D04 833 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 KCNJ8Q15842 424 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 PDE12Q6L8Q7 609 aaKnown RBP21.22■□□□□ 0.99
NFIX-203ENST00000397661 RETSATQ6NUM9 610 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 FAM180BQ6P0A1 224 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 CRTC1Q6UUV9 634 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 TMEM132CQ8N3T6 1108 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 LEMD2Q8NC56 503 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 HIST1H2AHQ96KK5 128 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 COPS8Q99627 209 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 HIST1H2AJQ99878 128 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 H2AFJQ9BTM1 129 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 REXO4Q9GZR2 422 aaKnown RBP21.22■□□□□ 0.99
NFIX-203ENST00000397661 ATP13A3Q9H7F0 1226 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 CFAP97Q9P2B7 532 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 SLCO3A1Q9UIG8 710 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 GSTM2P28161 218 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 SPAM1P38567 509 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 GP2P55259 537 aaKnown RBP21.22■□□□□ 0.99
NFIX-203ENST00000397661 LMAN2Q12907 356 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 ELAVL2Q12926 359 aaKnown RBP21.22■□□□□ 0.99
NFIX-203ENST00000397661 LAIR1Q6GTX8 287 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 OR52J3Q8NH60 311 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 ZNF461Q8TAF7 563 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 RPL3LQ92901 407 aaKnown RBP21.22■□□□□ 0.99
NFIX-203ENST00000397661 PYURFQ96I23 114 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 PALMDQ9NP74 551 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 KIF17Q9P2E2 1029 aa21.22■□□□□ 0.99
NFIX-203ENST00000397661 ENGP17813 658 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 CDK5R2Q13319 367 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 PSMA8Q8TAA3 256 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 P2RY13Q9BPV8 354 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 C2orf49Q9BVC5 232 aaPredicted RBP21.21■□□□□ 0.99
NFIX-203ENST00000397661 YTHDF1Q9BYJ9 559 aaKnown RBP21.21■□□□□ 0.99
NFIX-203ENST00000397661 AASDHPPTQ9NRN7 309 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 TMEFF2Q9UIK5 374 aaPredicted RBP21.21■□□□□ 0.99
NFIX-203ENST00000397661 PRAMEF4O60810 478 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 NDUFS2O75306 463 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 OPN1SWP03999 348 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 EBLN1P0CF75 366 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 PBLDP30039 288 aaPredicted RBP21.21■□□□□ 0.99
NFIX-203ENST00000397661 SEPHS1P49903 392 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 NCS1P62166 190 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 MADCAM1Q13477 382 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 PRAMEF9Q5VWM5 478 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 ADCK1Q86TW2 530 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 SLC22A16Q86VW1 577 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 SYT12Q8IV01 421 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 ZNF540Q8NDQ6 660 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 PDLIM5Q96HC4 596 aaKnown RBP21.21■□□□□ 0.99
NFIX-203ENST00000397661 MROQ9BYG7 248 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 MTG2Q9H4K7 406 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 MARCH7Q9H992 704 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 SERHLQ9NQF3 203 aa21.21■□□□□ 0.99
NFIX-203ENST00000397661 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.21■□□□□ 0.996e-6■■□□□ 14.4
NFIX-203ENST00000397661 DYTNA2CJ06 578 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 SCELO95171 688 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 B4GALNT1Q00973 533 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 KCNC4Q03721 635 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 CHIT1Q13231 466 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 MAD2L1Q13257 205 aaPredicted RBP21.2■□□□□ 0.98
NFIX-203ENST00000397661 CTF1Q16619 201 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 SPATS1Q496A3 300 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 LILRA3Q8N6C8 439 aaPredicted RBP21.2■□□□□ 0.98
NFIX-203ENST00000397661 OR5K1Q8NHB7 308 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 HDAC2Q92769 488 aaKnown RBP21.2■□□□□ 0.98
NFIX-203ENST00000397661 ABCB8Q9NUT2 735 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 SAMHD1Q9Y3Z3 626 aaKnown RBP21.2■□□□□ 0.98
NFIX-203ENST00000397661 NRG2O14511 850 aaPredicted RBP21.2■□□□□ 0.98
NFIX-203ENST00000397661 PABPC1P11940 636 aaKnown RBP21.2■□□□□ 0.98
NFIX-203ENST00000397661 JUNBP17275 347 aaPredicted RBP21.2■□□□□ 0.98
NFIX-203ENST00000397661 GABRR2P28476 465 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 VLDLRP98155 873 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 NPTX1Q15818 432 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 SYT16Q17RD7 645 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 ADPRMQ3LIE5 342 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 TTLL9Q3SXZ7 439 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 INO80DQ53TQ3 878 aaPredicted RBP21.2■□□□□ 0.98
NFIX-203ENST00000397661 HORMAD1Q86X24 394 aa21.2■□□□□ 0.98
NFIX-203ENST00000397661 HJURPQ8NCD3 748 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms