RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PSTPIP2Q9H939 334 aa6.55□□□□□ -1.36
SMCO1-201ENST00000397537 MAGEF1Q9HAY2 307 aa6.55□□□□□ -1.36
SMCO1-201ENST00000397537 YAE1D1Q9NRH1 226 aa6.55□□□□□ -1.36
SMCO1-201ENST00000397537 ZCCHC3Q9NUD5 404 aaKnown RBP6.55□□□□□ -1.36
SMCO1-201ENST00000397537 FAM30AQ9NZY2 134 aa6.55□□□□□ -1.36
SMCO1-201ENST00000397537 ATXN10Q9UBB4 475 aa6.55□□□□□ -1.36
SMCO1-201ENST00000397537 FOXA2Q9Y261 457 aaPredicted RBP6.55□□□□□ -1.36
SMCO1-201ENST00000397537 ARFGEF1Q9Y6D6 1849 aa6.55□□□□□ -1.36
SMCO1-201ENST00000397537 EIF3AQ14152 1382 aaKnown RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 C1orf226A1L170 272 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 ARHGEF35A5YM69 484 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 FFAR3O14843 346 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 GPR42O15529 346 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 PPIP5K2O43314 1243 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 WIPF1O43516 503 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CYTH3O43739 400 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 ECE2O60344 883 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CCNT1O60563 726 aaKnown RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 RPS6KA5O75582 802 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CLPXO76031 633 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 VNN1O95497 513 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 POMCP01189 267 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 DBHP09172 617 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 PRKAR1AP10644 381 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 RPL9P32969 192 aaKnown RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 ADMP35318 185 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 MC3RP41968 323 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CD97P48960 835 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 SIRPAP78324 504 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 ROR2Q01974 943 aaKnown RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 BST1Q10588 318 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 GNA13Q14344 377 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 HIST2H2ACQ16777 129 aaPredicted RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 ANKRD55Q3KP44 614 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CARD17Q5XLA6 110 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CYB5D1Q6P9G0 228 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 FAM198BQ6UWH4 519 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 SMIM5Q71RC9 77 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 KLHDC8AQ8IYD2 350 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 KATNAL2Q8IYT4 538 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 FITM2Q8N6M3 262 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 BCORP1Q8N888 145 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 OR14L1PQ8NHC6 308 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 TSEN15Q8WW01 171 aaKnown RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 TRIB2Q92519 343 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 PIGBQ92521 554 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 WDYHV1Q96HA8 205 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CDKN2AIPNLQ96HQ2 116 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 SPATA33Q96N06 139 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 ALS2CR12Q96Q35 445 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 GTPBP2Q9BX10 602 aaKnown RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 GPR87Q9BY21 358 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 MAGT1Q9H0U3 335 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CDCP1Q9H5V8 836 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 TMEM231Q9H6L2 316 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 KLHL28Q9NXS3 571 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CD300AQ9UGN4 299 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CRLS1Q9UJA2 301 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 SLC25A13Q9UJS0 675 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 CCNL1Q9UK58 526 aaPredicted RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 MAU2Q9Y6X3 613 aa6.54□□□□□ -1.36
SMCO1-201ENST00000397537 BRCA1P38398 1863 aaKnown RBP6.54□□□□□ -1.36
SMCO1-201ENST00000397537 WDR33Q9C0J8 1336 aaKnown RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 A0A1W2PPW3 197 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ERICH2A1L162 156 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 FITM1A5D6W6 292 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 CBY3A6NI87 242 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 BECN2A8MW95 431 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 SUPT3HB4E1H0 165 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 KBTBD13C9JR72 458 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 OPN1LWP04000 364 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PLA2G4BP0C869 781 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PRPS2P11908 318 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 FCER1AP12319 257 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 BMP3P12645 472 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 CYP2B6P20813 491 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 GPR143P51810 404 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 DGKQP52824 942 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 CLRN1P58418 232 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 DSTNP60981 165 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ZNF177Q13360 481 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 DRP2Q13474 957 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 PDLIM3Q53GG5 364 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 LRRC73Q5JTD7 316 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 CCNYL2Q5T2Q4 361 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 FAM173BQ6P4H8 233 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ADGRD2Q7Z7M1 963 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 MISPQ8IVT2 679 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 OR5M3Q8NGP4 307 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 SLC2A14Q8TDB8 520 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 TRPC4APQ8TEL6 797 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 GFM2Q969S9 779 aaKnown RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 SLC7A6OSQ96CW6 309 aaPredicted RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 BBS2Q9BXC9 721 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 TDRD1Q9BXT4 1180 aaKnown RBP6.53□□□□□ -1.36
SMCO1-201ENST00000397537 KLC2Q9H0B6 622 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 ANKFY1Q9P2R3 1169 aa6.53□□□□□ -1.36
SMCO1-201ENST00000397537 STX18Q9P2W9 335 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms