RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 KLK3P07288 261 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 CCND1P24385 295 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 ATP6V0D1P61421 351 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 CXADRP78310 365 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 BMPR2Q13873 1038 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 CSHL1Q14406 222 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 TSNQ15631 228 aaKnown RBP24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 CAPN13Q6MZZ7 669 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 CMC1Q7Z7K0 106 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 GSPT2Q8IYD1 628 aaKnown RBP24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 ZSCAN1Q8NBB4 408 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 SPRTNQ9H040 489 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 ACTR5Q9H9F9 607 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 IKZF3Q9UKT9 509 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 AP1M2Q9Y6Q5 423 aa24.37■■□□□ 1.49
TSPAN4-207ENST00000397411 ANXA5P08758 320 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 HBQ1P09105 142 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 SERPINB9P50453 376 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 ABHD18Q0P651 414 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 ZKSCAN8Q15776 578 aaPredicted RBP24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 PRAMEF17Q5VTA0 474 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 PRAMEF13Q5VWM6 474 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 SBSNQ6UWP8 590 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 SLC44A1Q8WWI5 657 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 FBXL8Q96CD0 374 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 PAFAH2Q99487 392 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 EFHD1Q9BUP0 239 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 GPN2Q9H9Y4 310 aaPredicted RBP24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 CPNE5Q9HCH3 593 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 ACOT9Q9Y305 439 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 PCDHB3Q9Y5E6 796 aa24.36■■□□□ 1.49
TSPAN4-207ENST00000397411 EXOC1LA0A1B0GW35 172 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 ZNF749O43361 778 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 TYK2P29597 1187 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 TBPL1P62380 186 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 YBX1P67809 324 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 TAF1BQ53T94 588 aaPredicted RBP24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 TLDC1Q6P9B6 456 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 LRRC56Q8IYG6 542 aaPredicted RBP24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 MR1Q95460 341 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 SELENOSQ9BQE4 189 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 NMRAL1Q9HBL8 299 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 SLC6A20Q9NP91 592 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 ANKMY1Q9P2S6 941 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 OARD1Q9Y530 152 aa24.35■■□□□ 1.49
TSPAN4-207ENST00000397411 USP24Q9UPU5 2620 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 A0A087X1B8 175 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 A0A0J9YVX5 310 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 RIPK2O43353 540 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 HCRTR1O43613 425 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 KRT38O76015 456 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 ABHD2P08910 425 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 DEKP35659 375 aaKnown RBP24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 GABRA4P48169 554 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 LGSNQ5TDP6 509 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 ARHGAP40Q5TG30 622 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 CCDC91Q7Z6B0 441 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 C17orf64Q86WR6 236 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 GPSM1Q86YR5 675 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 ZNF655Q8N720 491 aaPredicted RBP24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 CCDC77Q9BR77 488 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 PLCD4Q9BRC7 762 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 HAUS8Q9BT25 410 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 NDC1Q9BTX1 674 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 ASPMQ8IZT6 3477 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 EPG5Q9HCE0 2579 aa24.34■■□□□ 1.49
TSPAN4-207ENST00000397411 CACNA1BQ00975 2339 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 LOC101059948A0A1B0GTJ6 334 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 ZSCAN9O15535 394 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 SRPX2O60687 465 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 WISP3O95389 354 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 S100BP04271 92 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 LIFP15018 202 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 CD1DP15813 335 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 HRH2P25021 359 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 DLSTP36957 453 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 SERPINB8P50452 374 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 VSX2P58304 361 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 VAC14Q08AM6 782 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 SRSF6Q13247 344 aaKnown RBP24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 TCTE1Q5JU00 501 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.33■■□□□ 1.496e-6■■□□□ 13.5
TSPAN4-207ENST00000397411 PYCR2Q96C36 320 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 LHX9Q9NQ69 397 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 SNX15Q9NRS6 342 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 TXLNGQ9NUQ3 528 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 RNF112Q9ULX5 631 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 KLK4Q9Y5K2 254 aa24.33■■□□□ 1.49
TSPAN4-207ENST00000397411 HEATR5BQ9P2D3 2071 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 OR2A25A4D2G3 310 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 NCF1BA6NI72 391 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 NCF1CA8MVU1 366 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 H7BY64 318 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 CTSVO60911 334 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 KATNA1O75449 491 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 EIF2S1P05198 315 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 LTA4HP09960 611 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 SLC35E2BP0CK96 405 aa24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 NCF1P14598 390 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-207ENST00000397411 TCN2P20062 427 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms