RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 A0A1W2PPV9 198 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 FAM221BA6H8Z2 402 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 KDM1AO60341 852 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 KATNA1O75449 491 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 DKK1O94907 266 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 ESRRBO95718 433 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 OTCP00480 354 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 VIPP01282 170 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 PROS1P07225 676 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 KITP10721 976 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 CCND1P24385 295 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 EPHA8P29322 1005 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 ERVPABLB-1P60509 514 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 CDC16Q13042 620 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 GPR18Q14330 331 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 SH2D4BQ5SQS7 431 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 FAM219BQ5XKK7 198 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 SUSD1Q6UWL2 747 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 GPRIN3Q6ZVF9 776 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 PIGWQ7Z7B1 504 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 SLC9B2Q86UD5 537 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 C2orf73Q8N5S3 287 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 SNX31Q8N9S9 440 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 MAPK15Q8TD08 544 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 BCAS4Q8TDM0 211 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 SMPDL3AQ92484 453 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 ELAC2Q9BQ52 826 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 NTMT1Q9BV86 223 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 TWSG1Q9GZX9 223 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 ZZEF1O43149 2961 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 CFAP47Q6ZTR5 3102 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 TMEM233B4DJY2 109 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 DFNA5O60443 496 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 SNX3O60493 162 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 PRAMEF4O60810 478 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 FGF4P08620 206 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 TROVE2P10155 538 aaKnown RBP eCLIP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 NPPBP16860 134 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 SHMT2P34897 504 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 FASLGP48023 281 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 CCNG1P51959 295 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 MAZP56270 477 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 HHEXQ03014 270 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 PCDH1Q08174 1060 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 PRAMEF9Q5VWM5 478 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 PRAMEF13Q5VWM6 474 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 LETMD1Q6P1Q0 360 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 RBM12BQ8IXT5 1001 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 GPR156Q8NFN8 814 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 OR4F6Q8NGB9 312 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 RFWD2Q8NHY2 731 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 ZNF473Q8WTR7 871 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 SETD7Q8WTS6 366 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 JPH3Q8WXH2 748 aaPredicted RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 THOC1Q96FV9 657 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 CDK15Q96Q40 435 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 TRIM55Q9BYV6 548 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 NPHS2Q9NP85 383 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 GPRC5BQ9NZH0 403 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 NEUROG3Q9Y4Z2 214 aa16.36■□□□□ 0.21
TSPAN4-205ENST00000397406 CACNA1BQ00975 2339 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 MATN2O00339 956 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 ZNF195O14628 629 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 YKT6O15498 198 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 PRICKLE3O43900 615 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 OR4F21O95013 312 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 EBLN1P0CF75 366 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 ALOX15P16050 662 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 HK2P52789 917 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 FOXA1P55317 472 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 GABPB1Q06547 395 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 TSTA3Q13630 321 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 TERF2Q15554 542 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 UGT3A2Q3SY77 523 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 C6orf132Q5T0Z8 1188 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 KANK2Q63ZY3 851 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 LCTLQ6UWM7 567 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 MAVSQ7Z434 540 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 SPATA21Q7Z572 469 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 AMIGO1Q86WK6 493 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 MARCH9Q86YJ5 346 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 WDR75Q8IWA0 830 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 KIRREL3Q8IZU9 778 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 ARL14Q8N4G2 192 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 DCBLD1Q8N8Z6 715 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 KDF1Q8NAX2 398 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 SAP25Q8TEE9 199 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 LCN9Q8WX39 176 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 ADAMTS14Q8WXS8 1223 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 ATP6V1E2Q96A05 226 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 MIPEPQ99797 713 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 KCNK13Q9HB14 408 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 ABCF3Q9NUQ8 709 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 OR6C2Q9NZP2 312 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 KLHL14Q9P2G3 628 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 SH2B3Q9UQQ2 575 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 MSRB2Q9Y3D2 182 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 TRAF6Q9Y4K3 522 aa16.35■□□□□ 0.21
TSPAN4-205ENST00000397406 USH1CQ9Y6N9 552 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms