RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PPP3CCP48454 512 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 MXD1Q05195 221 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 E2F2Q14209 437 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 KIAA1614Q5VZ46 1190 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 LHX8Q68G74 356 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 PNCKQ6P2M8 343 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 SHQ1Q6PI26 577 aaKnown RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 LYPD8Q6UX82 237 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 RFPL4BQ6ZWI9 263 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 PRSS48Q7RTY5 328 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 CLDN19Q8N6F1 224 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 OR7G1Q8NGA0 311 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 MYEOVQ96EZ4 313 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF382Q96SR6 550 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 SH3GL1Q99961 368 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 RTP3Q9BQQ7 232 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 REEP1Q9H902 201 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 LRTM1Q9HBL6 345 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 RPRD1BQ9NQG5 326 aaKnown RBP9.58□□□□□ -0.88
TRIM39-203ENST00000396547 FBXL12Q9NXK8 326 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 NEUROG3Q9Y4Z2 214 aa9.58□□□□□ -0.88
TRIM39-203ENST00000396547 LOC285095A0A1B0GVY8 99 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 STX16O14662 325 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 STX7O15400 261 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 RGS14O43566 566 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 WBP4O75554 376 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 FGF1P05230 155 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 RPLP0P05388 317 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 FHP07954 510 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PTPN2P17706 415 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 POU1F1P28069 291 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 GNPDA1P46926 289 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 RGRP47804 291 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 TGM4P49221 684 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 NPRL3Q12980 569 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ARHGEF7Q14155 803 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ZMAT1Q5H9K5 638 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 MS4A13Q5J8X5 152 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PTRHD1Q6GMV3 140 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 OR4F3Q6IEY1 312 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 LIMS2Q7Z4I7 341 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 GPR149Q86SP6 731 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 LACC1Q8IV20 430 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 CACTIN-AS1Q8N1I8 211 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 CYP4Z2PQ8N1L4 340 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 RNF175Q8N4F7 328 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 BEND7Q8N7W2 519 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 MDGA1Q8NFP4 955 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF675Q8TD23 568 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PPP3R2Q96LZ3 170 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 FYTTD1Q96QD9 318 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 CNPPD1Q9BV87 410 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 EBPLQ9BY08 206 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 LATS2Q9NRM7 1088 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 NUFIP1Q9UHK0 495 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 RRN3P2A6NIE6 340 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 LOC730098B7Z3J9 87 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 RFXANKO14593 260 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 KIAA0513O60268 411 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 CPNE3O75131 537 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 SNAI1O95863 264 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PTTG1O95997 202 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ITGB1P05556 798 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PRKCAP17252 672 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 TACR1P25103 407 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 HOXA9P31269 272 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 SLC39A12Q504Y0 691 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 MANEALQ5VSG8 457 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 OVOS1Q6IE37 1185 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF544Q6NX49 715 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ENTHD1Q8IYW4 607 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 OR6F1Q8NGZ6 308 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 SPPL2AQ8TCT8 520 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 CD200R1Q8TD46 325 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 YME1L1Q96TA2 773 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 OR2B2Q9GZK3 357 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 AASDHPPTQ9NRN7 309 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 THUMPD1Q9NXG2 353 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 TAS2R9Q9NYW1 312 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 FLRT1Q9NZU1 646 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 DLGAP4Q9Y2H0 992 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PCDHGB1Q9Y5G3 927 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 COL1A2P08123 1366 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 FAM172BPA6NC97 362 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 C2orf81A6NN90 581 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 EVPLLA8MZ36 301 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 H3BM21 787 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 MEN1O00255 615 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 TSPAN12O95859 305 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PTHP01270 115 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 OPN1SWP03999 348 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 FABP3P05413 133 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF865P0CJ78 1059 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 BCKDHAP12694 445 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 HLA-DPA1P20036 260 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 OGNP20774 298 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 CA5AP35218 305 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms