RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MSRB3Q8IXL7 192 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 SYTL1Q8IYJ3 562 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 TBC1D21Q8IYX1 336 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 RNF175Q8N4F7 328 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 DTWD1Q8N5C7 304 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 OR2L2Q8NH16 312 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 ZNF480Q8WV37 535 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 NELL1Q92832 810 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 ELSPBP1Q96BH3 223 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 BIRC7Q96CA5 298 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 COX14Q96I36 57 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 METTL2AQ96IZ6 378 aaKnown RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 CNBD2Q96M20 576 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 EBPLQ9BY08 206 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 PAIP1Q9H074 479 aaKnown RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 DPEP2Q9H4A9 486 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 ITM2CQ9NQX7 267 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 SLC25A37Q9NYZ2 338 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 VPS29Q9UBQ0 182 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 PPT2Q9UMR5 302 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 RUVBL1Q9Y265 456 aaKnown RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 KCNE2Q9Y6J6 123 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 TICRRQ7Z2Z1 1910 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 ANTXRLA6NF34 631 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 MGAT4DA6NG13 374 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 AP1G1O43747 822 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 PRMT3O60678 531 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 PCCBP05166 539 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 LINGO3P0C6S8 592 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 CDH1P12830 882 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 GDI1P31150 447 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 DRD3P35462 400 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 HYAL1Q12794 435 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 CST6Q15828 149 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 ITPRIPL2Q3MIP1 535 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 RUNDC3AQ59EK9 446 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 INTS11Q5TA45 600 aaKnown RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 PPP4R4Q6NUP7 873 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 UNC5DQ6UXZ4 953 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 ZBTB49Q6ZSB9 765 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 TMPRSS11BQ86T26 416 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 CACUL1Q86Y37 369 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 RIMKLAQ8IXN7 391 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 TMEM132CQ8N3T6 1108 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 PLA2G15Q8NCC3 412 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 ZNF548Q8NEK5 533 aaPredicted RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 OR9A1PQ8NGU1 263 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 REPS1Q96D71 796 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 CENPNQ96H22 339 aaPredicted RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 ZNF583Q96ND8 569 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 MTERF1Q99551 399 aaKnown RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 CPPED1Q9BRF8 314 aaPredicted RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 THUMPD3Q9BV44 507 aaKnown RBP14.48□□□□□ -0.09
CBX3-202ENST00000396386 OSBPL11Q9BXB4 747 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 OSBPL6Q9BZF3 934 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 DYRK1BQ9Y463 629 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 CROCCQ5TZA2 2017 aa14.48□□□□□ -0.09
CBX3-202ENST00000396386 GSTA4O15217 222 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 MID1O15344 667 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 MYO1DO94832 1006 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 LRATO95237 230 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 ADH1BP00325 375 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 PCNAP12004 261 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 PRPS1L1P21108 318 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 WASP42768 502 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 CLCN2P51788 898 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 HNRNPFP52597 415 aaKnown RBP14.47□□□□□ -0.09
CBX3-202ENST00000396386 PRKCQQ04759 706 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 ACSM2AQ08AH3 577 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 E2F2Q14209 437 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 NFE2L1Q14494 772 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 STARD3Q14849 445 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 PGS1Q32NB8 556 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 AGBL4Q5VU57 503 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 ATG9BQ674R7 924 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 ACSM2BQ68CK6 577 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 HEATR4Q86WZ0 1026 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 STARD8Q92502 1023 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 HHIPQ96QV1 700 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 C9orf16Q9BUW7 83 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 RSPH9Q9H1X1 276 aaPredicted RBP14.47□□□□□ -0.09
CBX3-202ENST00000396386 IKZF5Q9H5V7 419 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 SLC28A3Q9HAS3 691 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 SERHLQ9NQF3 203 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 C8orf4Q9NR00 106 aa14.47□□□□□ -0.09
CBX3-202ENST00000396386 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.46□□□□□ -0.09
CBX3-202ENST00000396386 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.46□□□□□ -0.09
CBX3-202ENST00000396386 C7orf72A4D263 438 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 FAM149AA5PLN7 773 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 FAM220BPB1ANY3 271 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 SOCS2O14508 198 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 CKMT2P17540 419 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 KIR3DL1P43629 444 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 CCT8P50990 548 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 PHC1P78364 1004 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 MTAPQ13126 283 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 ENPP2Q13822 863 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 ATP6AP1Q15904 470 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 GTDC1Q4AE62 458 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 MED27Q6P2C8 311 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms