RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 TMEFF2Q9UIK5 374 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 FBXO10Q9UK96 956 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 ERVK-11Q9UQG0 969 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 FCF1Q9Y324 198 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 CAB39Q9Y376 341 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 PCDHB1Q9Y5F3 818 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 PRSS21Q9Y6M0 314 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 GBF1Q92538 1859 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 RECQL5O94762 991 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 FADS2O95864 444 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 KLKB1P03952 638 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 BCKDHAP12694 445 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 SPNP16150 400 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 EPB42P16452 691 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 CA5AP35218 305 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 ARF5P84085 180 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 SMN1Q16637 294 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 COLEC12Q5KU26 742 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 UBE2UQ5VVX9 321 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 ZDHHC21Q8IVQ6 265 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 PDLIM5Q96HC4 596 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 BARD1Q99728 777 aaKnown RBP13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 INPP5KQ9BT40 448 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 CD244Q9BZW8 370 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 CLMPQ9H6B4 373 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 C1orf109Q9NX04 203 aa13.67□□□□□ -0.22
CCHCR1-203ENST00000396268 NRG2O14511 850 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 UGT2B4P06133 528 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 S100A3P33764 101 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 NEK2P51955 445 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 FOXD4Q12950 439 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 NPTX1Q15818 432 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 FAR1Q8WVX9 515 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 PYURFQ96I23 114 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 VNN3Q9NY84 501 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 PCDHGA3Q9Y5H0 932 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 A8MV72 311 aaPredicted RBP13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 H7C0S8 307 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 PER2O15055 1255 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 GLUD1P00367 558 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 RETP07949 1114 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 CCDC159P0C7I6 412 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 HMGA1P17096 107 aaKnown RBP13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 DGKAP23743 735 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 COPZ1P61923 177 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 PHC1P78364 1004 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 PLD1Q13393 1074 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 AGAP7PQ5VUJ5 663 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 GALNT10Q86SR1 603 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 WDR12Q9GZL7 423 aaKnown RBP13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 DLGAP4Q9Y2H0 992 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 OARD1Q9Y530 152 aa13.66□□□□□ -0.22
CCHCR1-203ENST00000396268 A0A1B0GVM2 712 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 C2orf78A6NCI8 922 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 MANBAO00462 879 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 AREL1O15033 823 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 SNPHO15079 494 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 BMP1P13497 986 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 ARHGDIAP52565 204 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 RFX4Q33E94 735 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 NCEH1Q6PIU2 408 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 CYP4Z1Q86W10 505 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 SYTL1Q8IYJ3 562 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 TMEM132CQ8N3T6 1108 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 CARNMT1Q8N4J0 409 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 PIK3C3Q8NEB9 887 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 ZNF461Q8TAF7 563 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 SKA2Q8WVK7 121 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 SPATA17Q96L03 361 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 C6orf62Q9GZU0 229 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 ANKMY1Q9P2S6 941 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 INTS6Q9UL03 887 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 hCG_2039718K7EN88 272 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 ZDHHC11BP0C7U3 371 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 LINC00271P0C7V0 271 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 PSMA3P25788 255 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 MZF1P28698 734 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 HMGCLP35914 325 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 NRIP1P48552 1158 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 RPS14P62263 151 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 IFITM2Q01629 132 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 SYT16Q17RD7 645 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 C5orf22Q49AR2 442 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 CERS6Q6ZMG9 384 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 RBFAQ8N0V3 343 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 ZNF540Q8NDQ6 660 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 FAM83FQ8NEG4 500 aaPredicted RBP13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 SELENOMQ8WWX9 145 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 UBE2FQ969M7 185 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 CEP44Q9C0F1 390 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 RNF38Q9H0F5 515 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 TRIT1Q9H3H1 467 aaKnown RBP13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 PRM3Q9NNZ6 103 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 SCN3BQ9NY72 215 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 CRLS1Q9UJA2 301 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 BOLA1Q9Y3E2 137 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 GMPPBQ9Y5P6 360 aa13.65□□□□□ -0.22
CCHCR1-203ENST00000396268 FAM47E-STBD1D6RA91 191 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms