RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 BCL2L1Q07817 233 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 CSTF3Q12996 717 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 TEAD4Q15561 434 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 PRR23CQ6ZRP0 262 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 CBLL1Q75N03 491 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 GALNT5Q7Z7M9 940 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 CYP4Z1Q86W10 505 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 DEPDC4Q8N2C3 294 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 L3MBTL4Q8NA19 623 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 HJURPQ8NCD3 748 aaPredicted RBP9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 PANX1Q96RD7 426 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 GABARAPL3Q9BY60 117 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 ACPTQ9BZG2 426 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 KLHL25Q9H0H3 589 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 THG1LQ9NWX6 298 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 ARL15Q9NXU5 204 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 CCDC59Q9P031 241 aaKnown RBP9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 ATP11BQ9Y2G3 1177 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 PCDHGB3Q9Y5G1 929 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 ACTL7AQ9Y615 435 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 BPTFQ12830 3046 aa9.77□□□□□ -0.85
UBE2D3-208ENST00000394803 MAGEB17A8MXT2 336 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TTC34A8MYJ7 566 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CLIC1O00299 241 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 FPGTO14772 594 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 HOXA2O43364 376 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 UPK1BO75841 260 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 STC2O76061 302 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 PDYNP01213 254 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TRBC1P01850 177 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 SEMG1P04279 462 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 OR56A5P0C7T3 313 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 MPC1LP0DKB6 136 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 MYCLP1P12525 358 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 RPIAP49247 311 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 AP1S2P56377 157 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 C21orf58P58505 322 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 PHC1P78364 1004 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 NPRL3Q12980 569 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 DUSP4Q13115 394 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 ELOAQ14241 798 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 PHKG1Q16816 387 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TRIM71Q2Q1W2 868 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 GTDC1Q4AE62 458 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CXorf57Q6NSI4 855 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 ZCCHC8Q6NZY4 707 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 FAHD1Q6P587 224 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 RNF19BQ6ZMZ0 732 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 PAGE2Q7Z2X7 111 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CADM3Q8N126 398 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 NXPE1Q8N323 547 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 DCAF4L2Q8NA75 395 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TRPV1Q8NER1 839 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 HHIPQ96QV1 700 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 C2orf49Q9BVC5 232 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 SLIRPQ9GZT3 109 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 DCSTAMPQ9H295 470 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TNKS2Q9H2K2 1166 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 FARSBQ9NSD9 589 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 A8MVJ9 347 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 ARVCFO00192 962 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TOR1BO14657 336 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 ADAMDEC1O15204 470 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 AIREO43918 545 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 B4GALT3O60512 393 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 ADAMTS4O75173 837 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 MED26O95402 600 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 RPLP0P05388 317 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 SDC1P18827 310 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CYP2A7P20853 494 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 S100A1P23297 94 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 PTPN6P29350 595 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 HOXD12P35452 270 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 GDF5P43026 501 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CTSKP43235 329 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 MAP2K4P45985 399 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 PXNP49023 591 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 ALDH7A1P49419 539 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CAMK2GQ13555 558 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 KCNC3Q14003 757 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 DGCR6Q14129 220 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CPSF6Q16630 551 aaKnown RBP eCLIP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TIMM50Q3ZCQ8 353 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CARD16Q5EG05 197 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TOR1AIP1Q5JTV8 583 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 ANXA8L1Q5VT79 327 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 FUT10Q6P4F1 479 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 SYT12Q8IV01 421 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 ZZZ3Q8IYH5 903 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 OR8J2Q8NGG1 315 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 C9orf43Q8TAL5 461 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 PIH1D2Q8WWB5 315 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TRIB2Q92519 343 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 HPS1Q92902 700 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 CRELD1Q96HD1 420 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TXNDC15Q96J42 360 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 HRASLS5Q96KN8 279 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 FCRL1Q96LA6 429 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 HEPHQ9BQS7 1158 aa9.76□□□□□ -0.85
UBE2D3-208ENST00000394803 TMEM175Q9BSA9 504 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms