RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ERVK-18Q9QC07 812 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 TRPS1Q9UHF7 1281 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 SLCO3A1Q9UIG8 710 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 BTBD3Q9Y2F9 522 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 KCNE1BA0A087WTH5 132 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 MYO1GB0I1T2 1018 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 NEDD8-MDP1E9PL57 170 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 SLC1A7O00341 560 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 FGBP02675 491 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 NUDT7P0C024 238 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 SRCP12931 536 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 HOXB9P17482 250 aaPredicted RBP13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 CD22P20273 847 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 CTNNB1P35222 781 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 NRIP1P48552 1158 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 NTHL1P78549 312 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 GRSF1Q12849 480 aaKnown RBP eCLIP13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 POM121L1PQ3SYA9 428 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 ZNF697Q5TEC3 545 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 SMYD1Q8NB12 490 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 CHST14Q8NCH0 376 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 ZNF555Q8NEP9 628 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 MTG2Q9H4K7 406 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 ZNF510Q9Y2H8 683 aa13.1□□□□□ -0.31
GTF2F1-201ENST00000394456 BCAS1O75363 584 aaPredicted RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 IGSF6O95976 241 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 FUCA1P04066 466 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 UGT2B4P06133 528 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 C21orf59P57076 290 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 IL5RAQ01344 420 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 FOXD4Q12950 439 aaPredicted RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 CCSMST1Q4G0I0 132 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ZCCHC8Q6NZY4 707 aaKnown RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ASIC4Q96FT7 647 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 MTERF1Q99551 399 aaKnown RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ELOVL6Q9H5J4 265 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ZDHHC6Q9H6R6 413 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ATP13A3Q9H7F0 1226 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 PCDH12Q9NPG4 1184 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 SCELO95171 688 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ANXA5P08758 320 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 JUNBP17275 347 aaPredicted RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 MSH3P20585 1137 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 DAPP51397 102 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 GBX1Q14549 363 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 SKIV2LQ15477 1246 aaKnown RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 MPP7Q5T2T1 576 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 Q6ZPB1 254 aaPredicted RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ZDHHC21Q8IVQ6 265 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 LEMD2Q8NC56 503 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 OR2AP1Q8NGE2 309 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 UBTD2Q8WUN7 234 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 HTATIP2Q9BUP3 242 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 EMILIN2Q9BXX0 1053 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 LINC00597Q9H2U6 94 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 SLC32A1Q9H598 525 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 SIRT5Q9NXA8 310 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 ZNF451Q9Y4E5 1061 aa13.09□□□□□ -0.31
GTF2F1-201ENST00000394456 CARNS1A5YM72 827 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CPSF4O95639 269 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 BCL10O95999 233 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 C1SP09871 688 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 PCMT1P22061 227 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 AOAHP28039 575 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 GSTM2P28161 218 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 AQP1P29972 269 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CD6P30203 668 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 IDUAP35475 653 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 OPRL1P41146 370 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CLDN8P56748 225 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 VLDLRP98155 873 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CD300CQ08708 224 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 TTC23Q5W5X9 447 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 PRR23BQ6ZRT6 265 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 ARL10Q8N8L6 244 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 OR5K1Q8NHB7 308 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 POF1BQ8WVV4 589 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 PYURFQ96I23 114 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CCDC138Q96M89 665 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 YTHDF1Q9BYJ9 559 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 REXO4Q9GZR2 422 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 FAIMQ9NVQ4 179 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 THG1LQ9NWX6 298 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 REV3LO60673 3130 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 RFXANKO14593 260 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 SERPINA4P29622 427 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 IRS1P35568 1242 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 HALP42357 657 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CLK3P49761 638 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 EMX1Q04741 257 aaPredicted RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CDK5R2Q13319 367 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms